Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm17061-201ENSMUST00000163167 499 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm22395-201ENSMUST00000177427 96 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Mir6401-201ENSMUST00000184499 109 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm27964-201ENSMUST00000185195 62 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm8600-201ENSMUST00000186320 905 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm19620-201ENSMUST00000195972 434 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm44348-201ENSMUST00000200165 122 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm24626-201ENSMUST00000082621 161 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm24928-201ENSMUST00000083399 107 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm24254-201ENSMUST00000083702 104 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm25897-201ENSMUST00000083709 107 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
H2afb1Q9CQ70 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm13379-201ENSMUST00000118053 621 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm15387-201ENSMUST00000120421 648 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm11403-201ENSMUST00000122195 369 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm25557-201ENSMUST00000158084 315 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm22211-201ENSMUST00000158097 156 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm24503-201ENSMUST00000158454 135 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm23777-201ENSMUST00000158994 259 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Mir6411-201ENSMUST00000183556 108 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm28552-201ENSMUST00000190725 388 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm37164-201ENSMUST00000192809 637 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm4052-201ENSMUST00000220890 451 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm25481-201ENSMUST00000083221 158 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm5518-201ENSMUST00000084171 648 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.09□□□□□ -1.91
H2afb1Q9CQ70 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
H2afb1Q9CQ70 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm23481-201ENSMUST00000104173 131 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm13087-201ENSMUST00000118298 256 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm13155-201ENSMUST00000119277 646 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm11252-201ENSMUST00000120572 939 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm8178-201ENSMUST00000121570 646 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm9785-202ENSMUST00000144563 593 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm20648-201ENSMUST00000175815 328 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm10067-201ENSMUST00000179462 348 ntBASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.08□□□□□ -1.92
H2afb1Q9CQ70 Gm27611-201ENSMUST00000184690 108 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms