Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.26□□□□□ -1.89
Use1Q9CQ56 Gm18388-201ENSMUST00000222339 557 ntBASIC3.26□□□□□ -1.89
Use1Q9CQ56 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.26□□□□□ -1.89
Use1Q9CQ56 Gm10042-201ENSMUST00000079884 78 ntBASIC3.26□□□□□ -1.89
Use1Q9CQ56 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Use1Q9CQ56 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Use1Q9CQ56 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.26□□□□□ -1.89
Use1Q9CQ56 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Use1Q9CQ56 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Use1Q9CQ56 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
Use1Q9CQ56 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm26418-201ENSMUST00000104275 137 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm11881-201ENSMUST00000119408 572 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm14008-201ENSMUST00000120483 274 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm7350-201ENSMUST00000120964 636 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm5963-201ENSMUST00000143451 236 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm22726-201ENSMUST00000158089 179 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm23312-201ENSMUST00000158774 102 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Mir7031-201ENSMUST00000183860 65 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Mir7074-201ENSMUST00000183884 63 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Mir3620-201ENSMUST00000184710 61 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm8498-201ENSMUST00000188227 974 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm20203-201ENSMUST00000192352 332 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm17781-201ENSMUST00000195232 649 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm18327-201ENSMUST00000202426 830 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm44266-201ENSMUST00000205235 500 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm9628-201ENSMUST00000222169 725 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm25147-201ENSMUST00000083030 105 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Use1Q9CQ56 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.25□□□□□ -1.89
Use1Q9CQ56 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Use1Q9CQ56 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm15014-201ENSMUST00000120742 258 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm6591-201ENSMUST00000121063 434 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm14126-201ENSMUST00000122345 395 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm26276-201ENSMUST00000157099 109 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm22310-201ENSMUST00000157509 116 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm23775-201ENSMUST00000158991 249 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm22917-201ENSMUST00000180116 110 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm18486-201ENSMUST00000184040 298 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm43115-201ENSMUST00000196244 160 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm18429-201ENSMUST00000198707 421 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm45409-201ENSMUST00000211486 252 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm25480-201ENSMUST00000083217 133 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm22864-201ENSMUST00000083950 130 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.24□□□□□ -1.89
Use1Q9CQ56 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Use1Q9CQ56 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms