Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rpa1Q8VEE4 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Rpa1Q8VEE4 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Rpa1Q8VEE4 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
Rpa1Q8VEE4 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.46□□□□□ -1.53
Rpa1Q8VEE4 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm12494-201ENSMUST00000121684 521 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm22435-201ENSMUST00000158552 128 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm17366-201ENSMUST00000167629 187 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm3170-201ENSMUST00000168753 850 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm20530-201ENSMUST00000174261 254 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm3348-201ENSMUST00000177813 850 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Mir7046-201ENSMUST00000183435 66 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm37338-201ENSMUST00000191986 127 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm8719-201ENSMUST00000203602 534 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm44059-201ENSMUST00000204048 351 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm44523-201ENSMUST00000205616 417 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm4083-201ENSMUST00000207158 451 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm25134-201ENSMUST00000082646 160 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm24042-201ENSMUST00000083114 103 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rpa1Q8VEE4 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm22371-201ENSMUST00000104588 130 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm13250-201ENSMUST00000117209 753 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm11923-201ENSMUST00000118135 508 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm12646-201ENSMUST00000119144 238 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm12237-201ENSMUST00000120158 470 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm7327-201ENSMUST00000120925 652 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm7308-201ENSMUST00000121087 447 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm12413-201ENSMUST00000121508 312 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm25117-201ENSMUST00000157194 144 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm25621-201ENSMUST00000157223 114 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm23995-201ENSMUST00000158060 129 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm17152-201ENSMUST00000172430 535 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm5558-201ENSMUST00000178933 495 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm26731-201ENSMUST00000180683 543 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm28660-201ENSMUST00000186496 253 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm8241-201ENSMUST00000189286 816 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm9332-201ENSMUST00000198431 730 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm19243-201ENSMUST00000198592 269 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm7407-201ENSMUST00000208301 568 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm18127-201ENSMUST00000208479 725 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm6065-201ENSMUST00000081336 492 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Gm23721-201ENSMUST00000083005 107 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rpa1Q8VEE4 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms