Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm23098-201ENSMUST00000157552 299 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm22516-201ENSMUST00000158266 124 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm23583-201ENSMUST00000158533 289 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm19203-201ENSMUST00000174049 939 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm22120-201ENSMUST00000175590 70 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm25198-201ENSMUST00000178574 110 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Mir713-201ENSMUST00000178651 108 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm20811-201ENSMUST00000190500 553 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm42593-201ENSMUST00000198469 377 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm43198-201ENSMUST00000200927 326 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm21089-201ENSMUST00000215843 325 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm23628-201ENSMUST00000082464 173 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm25205-201ENSMUST00000082841 103 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vps39Q8R5L3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm22758-201ENSMUST00000102275 96 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm13379-201ENSMUST00000118053 621 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm13678-201ENSMUST00000118926 340 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm14103-201ENSMUST00000119075 366 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm15157-201ENSMUST00000121852 702 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm25369-201ENSMUST00000158848 132 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm20542-201ENSMUST00000174582 372 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Mir6401-201ENSMUST00000184499 109 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm37164-201ENSMUST00000192809 637 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm9373-201ENSMUST00000208724 599 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm45553-201ENSMUST00000209929 507 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm18644-201ENSMUST00000211458 815 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm18120-201ENSMUST00000220079 511 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm4052-201ENSMUST00000220890 451 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm10780-201ENSMUST00000099459 285 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps39Q8R5L3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm11693-201ENSMUST00000119625 565 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm11446-201ENSMUST00000121319 866 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm22480-201ENSMUST00000122568 128 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm10357-201ENSMUST00000159886 264 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm20399-201ENSMUST00000174652 132 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm22252-201ENSMUST00000179316 79 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm6113-201ENSMUST00000180319 639 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm44727-201ENSMUST00000204225 451 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms