Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Clrn1Q8K445 Olfr197-201ENSMUST00000080031 926 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Gm23626-201ENSMUST00000082458 133 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Gm23096-201ENSMUST00000083447 107 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.5□□□□□ -1.69
Clrn1Q8K445 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Clrn1Q8K445 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.5□□□□□ -1.69
Clrn1Q8K445 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Mir147-201ENSMUST00000102354 79 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm24608-201ENSMUST00000104381 136 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm14681-201ENSMUST00000118047 411 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm13491-201ENSMUST00000118267 235 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm15493-201ENSMUST00000119461 528 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm25103-201ENSMUST00000122671 318 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm25290-201ENSMUST00000122796 144 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm23855-201ENSMUST00000158377 135 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm22940-201ENSMUST00000158560 155 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm3531-201ENSMUST00000162698 489 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Mir3964-201ENSMUST00000174898 74 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm21991-201ENSMUST00000180006 508 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm43669-201ENSMUST00000198229 436 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm42814-201ENSMUST00000199370 460 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm43083-201ENSMUST00000199594 476 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm44011-201ENSMUST00000203336 394 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm44184-201ENSMUST00000204290 132 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm18850-201ENSMUST00000211578 388 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm17990-201ENSMUST00000211728 553 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.49□□□□□ -1.69
Clrn1Q8K445 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Clrn1Q8K445 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm15297-201ENSMUST00000117795 290 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm15333-201ENSMUST00000118825 364 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm11325-201ENSMUST00000119967 469 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm13787-201ENSMUST00000120422 168 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm22479-201ENSMUST00000122566 81 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm23167-201ENSMUST00000157155 103 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm22870-201ENSMUST00000157501 112 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm22290-201ENSMUST00000177655 107 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm22583-201ENSMUST00000178031 107 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm19206-201ENSMUST00000186401 827 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm45105-201ENSMUST00000207824 397 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm8785-201ENSMUST00000220259 487 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 AV026068-237ENSMUST00000226075 572 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms