Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm336-201ENSMUST00000186376 1480 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm23957-201ENSMUST00000157209 90 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm23865-201ENSMUST00000157723 97 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm24550-201ENSMUST00000158648 279 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm19418-201ENSMUST00000197436 580 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm44348-201ENSMUST00000200165 122 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm18645-201ENSMUST00000209593 651 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm45245-201ENSMUST00000210082 376 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm25800-201ENSMUST00000082636 134 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Nup88Q8CEC0 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm25764-201ENSMUST00000104092 134 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Mir208b-201ENSMUST00000104735 77 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm14677-201ENSMUST00000117866 486 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm11600-201ENSMUST00000119592 240 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm26001-201ENSMUST00000157989 103 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm9613-201ENSMUST00000171662 196 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Mir6408-201ENSMUST00000183643 91 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm5731-201ENSMUST00000190969 481 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm2314-201ENSMUST00000200391 586 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 AL929265.1-201ENSMUST00000213427 125 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm3565-201ENSMUST00000222670 609 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm24254-201ENSMUST00000083702 104 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Olfr203-201ENSMUST00000089305 924 ntBASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nup88Q8CEC0 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm14607-201ENSMUST00000119119 491 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm9078-201ENSMUST00000119126 617 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm12873-201ENSMUST00000119988 422 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm22320-201ENSMUST00000157149 312 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm24289-201ENSMUST00000157629 135 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm25553-201ENSMUST00000158076 79 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm23257-201ENSMUST00000158322 132 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm28500-201ENSMUST00000190286 151 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm37599-201ENSMUST00000193067 489 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.29□□□□□ -1.72
Nup88Q8CEC0 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms