Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Mir184-201ENSMUST00000083662 69 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm12982-201ENSMUST00000117408 190 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm12723-201ENSMUST00000120700 451 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm13009-201ENSMUST00000121307 267 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm11385-201ENSMUST00000121513 570 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm13366-201ENSMUST00000122198 970 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm22961-201ENSMUST00000157964 106 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm24730-201ENSMUST00000158228 117 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm22367-201ENSMUST00000178930 132 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm26297-201ENSMUST00000179464 132 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm44513-201ENSMUST00000206811 439 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm5265-201ENSMUST00000076828 342 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.14□□□□□ -1.91
Trub1Q8C0D0 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm8475-201ENSMUST00000118211 526 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm11965-201ENSMUST00000122017 277 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm22187-201ENSMUST00000157819 129 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm28628-201ENSMUST00000187006 264 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm28629-201ENSMUST00000187309 263 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm32340-201ENSMUST00000192883 259 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm43975-201ENSMUST00000203023 481 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm45689-201ENSMUST00000210522 133 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm23460-201ENSMUST00000083258 109 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm26121-201ENSMUST00000083364 162 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.13□□□□□ -1.91
Trub1Q8C0D0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm14564-201ENSMUST00000122159 294 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms