Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm25765-201ENSMUST00000104100 132 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm5963-201ENSMUST00000143451 236 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm25341-201ENSMUST00000157461 268 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm23583-201ENSMUST00000158533 289 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm22890-201ENSMUST00000158642 144 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm4207-201ENSMUST00000173144 960 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm20693-201ENSMUST00000177431 211 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm44475-201ENSMUST00000204041 424 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm25004-201ENSMUST00000083811 161 ntBASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc40Q8BI79 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm5757-201ENSMUST00000117494 528 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm13650-201ENSMUST00000117729 433 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm11393-201ENSMUST00000118019 288 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm15854-201ENSMUST00000118879 808 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm22120-201ENSMUST00000175590 70 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm22252-201ENSMUST00000179316 79 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm44585-201ENSMUST00000207150 607 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm45814-201ENSMUST00000212646 775 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc40Q8BI79 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Mir667-201ENSMUST00000102441 92 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm15613-201ENSMUST00000118396 326 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm11693-201ENSMUST00000119625 565 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm16017-201ENSMUST00000119834 208 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm13471-201ENSMUST00000122057 433 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm25883-201ENSMUST00000157781 271 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm26219-201ENSMUST00000175216 71 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm27834-201ENSMUST00000183427 125 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm7634-201ENSMUST00000185778 553 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm37684-201ENSMUST00000192779 355 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm37791-201ENSMUST00000195081 286 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm45072-201ENSMUST00000208673 929 ntBASIC3.8□□□□□ -1.8
Ccdc40Q8BI79 Gm45312-201ENSMUST00000210566 311 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms