Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Gm23116-201ENSMUST00000158481 67 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm25528-201ENSMUST00000180264 132 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm28967-201ENSMUST00000187351 281 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43655-201ENSMUST00000197367 222 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm45588-201ENSMUST00000211213 630 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm13717-201ENSMUST00000119868 365 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm11866-201ENSMUST00000120209 335 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm13440-201ENSMUST00000121665 496 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm24690-201ENSMUST00000157759 97 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm27700-201ENSMUST00000185003 81 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm28149-201ENSMUST00000187102 378 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm28768-201ENSMUST00000189034 378 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm38217-201ENSMUST00000194358 910 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43124-201ENSMUST00000201878 278 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm22154-201ENSMUST00000083844 131 ntBASIC3.19□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm13443-201ENSMUST00000120770 555 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm16471-201ENSMUST00000121940 618 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm14768-201ENSMUST00000122126 678 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm24879-201ENSMUST00000158386 143 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm25048-201ENSMUST00000158598 91 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm29556-201ENSMUST00000187591 696 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88cQ6VGS5 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm23063-201ENSMUST00000102350 93 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm5754-201ENSMUST00000118774 892 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm6461-201ENSMUST00000120015 633 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43415-201ENSMUST00000201934 750 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm18871-201ENSMUST00000218655 745 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Snora23-201ENSMUST00000082517 184 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Snora70-201ENSMUST00000083047 137 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm14930-201ENSMUST00000118864 652 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm14578-201ENSMUST00000122166 391 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 DQ267100-201ENSMUST00000122600 72 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm24443-201ENSMUST00000157242 132 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm7582-201ENSMUST00000160831 603 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm3370-201ENSMUST00000171785 500 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm19791-201ENSMUST00000180398 859 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm43974-201ENSMUST00000205080 684 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm45789-201ENSMUST00000213038 364 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Olfr192-201ENSMUST00000080251 925 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm26072-201ENSMUST00000083135 107 ntBASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc88cQ6VGS5 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm14981-201ENSMUST00000117325 943 ntBASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm24291-201ENSMUST00000157633 162 ntBASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm37081-201ENSMUST00000192034 196 ntBASIC3.16□□□□□ -1.9
Ccdc88cQ6VGS5 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms