Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm27233-201ENSMUST00000184030 307 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm29334-201ENSMUST00000190334 357 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb4Q6P8W9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm15785-201ENSMUST00000119145 694 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm11600-201ENSMUST00000119592 240 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm12873-201ENSMUST00000119988 422 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm16327-201ENSMUST00000137146 228 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm25553-201ENSMUST00000158076 79 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm6395-201ENSMUST00000167639 691 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Mir8118-201ENSMUST00000183962 129 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm27828-201ENSMUST00000184108 119 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm37001-201ENSMUST00000193377 190 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm42438-201ENSMUST00000197832 974 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm35262-201ENSMUST00000215133 267 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm24147-201ENSMUST00000082763 144 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Mir30e-201ENSMUST00000083475 92 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm22578-201ENSMUST00000083730 107 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb4Q6P8W9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm12636-201ENSMUST00000117395 624 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm14739-201ENSMUST00000120424 802 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm6969-201ENSMUST00000140065 342 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm22143-201ENSMUST00000157401 203 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Zfp950-206ENSMUST00000178819 171 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm18667-201ENSMUST00000186523 484 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm5731-201ENSMUST00000190969 481 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm43004-201ENSMUST00000201872 703 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm45245-201ENSMUST00000210082 376 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm18644-201ENSMUST00000211458 815 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm18729-201ENSMUST00000217230 621 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Mir421-201ENSMUST00000083575 76 ntBASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Hmgb4Q6P8W9 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb4Q6P8W9 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.92□□□□□ -1.78
Hmgb4Q6P8W9 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.92□□□□□ -1.78
Hmgb4Q6P8W9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms