Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm46996-201ENSMUST00000220924 408 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm12213-201ENSMUST00000119924 353 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm44161-201ENSMUST00000203532 253 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm26121-201ENSMUST00000083364 162 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm24446-201ENSMUST00000083982 156 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.37□□□□□ -2.03
Col7a1Q63870 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col7a1Q63870 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm22472-201ENSMUST00000104115 134 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm24670-201ENSMUST00000104154 132 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm11866-201ENSMUST00000120209 335 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm15022-201ENSMUST00000122074 746 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm24720-201ENSMUST00000157518 166 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm45395-201ENSMUST00000209891 559 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm9208-201ENSMUST00000120468 948 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gm42828-201ENSMUST00000199669 469 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col7a1Q63870 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col7a1Q63870 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col7a1Q63870 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col7a1Q63870 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Col7a1Q63870 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col7a1Q63870 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.36□□□□□ -2.03
Col7a1Q63870 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Col7a1Q63870 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm25500-201ENSMUST00000104426 123 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm15021-201ENSMUST00000117832 742 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm18604-201ENSMUST00000172535 558 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.35□□□□□ -2.03
Col7a1Q63870 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm15162-201ENSMUST00000119325 283 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm29484-201ENSMUST00000186067 324 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm18448-201ENSMUST00000186286 599 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm2979-201ENSMUST00000193442 463 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm19596-201ENSMUST00000203685 739 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col7a1Q63870 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col7a1Q63870 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm22752-201ENSMUST00000102083 109 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm24889-201ENSMUST00000104388 132 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm13588-201ENSMUST00000120026 135 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Gm12288-201ENSMUST00000121054 1282 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.35□□□□□ -2.03
Col7a1Q63870 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col7a1Q63870 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col7a1Q63870 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col7a1Q63870 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm13009-201ENSMUST00000121307 267 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Mir3058-201ENSMUST00000175126 91 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm22264-201ENSMUST00000178200 107 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm44016-201ENSMUST00000203463 164 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm44869-201ENSMUST00000208836 357 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms