Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Mir6917-201ENSMUST00000184111 61 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm29563-201ENSMUST00000187249 496 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm28069-201ENSMUST00000189926 214 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm29524-201ENSMUST00000190819 699 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm5983-201ENSMUST00000197739 770 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm43214-201ENSMUST00000199242 352 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm8774-201ENSMUST00000203621 692 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Usf1Q61069 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Usf1Q61069 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Usf1Q61069 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usf1Q61069 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usf1Q61069 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usf1Q61069 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usf1Q61069 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usf1Q61069 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usf1Q61069 Gm14142-201ENSMUST00000117833 296 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm15231-201ENSMUST00000119174 447 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm12873-201ENSMUST00000119988 422 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm14101-201ENSMUST00000121502 473 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.3□□□□□ -1.88
Usf1Q61069 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Usf1Q61069 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usf1Q61069 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm5731-201ENSMUST00000190969 481 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm42438-201ENSMUST00000197832 974 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Usf1Q61069 Gm43967-201ENSMUST00000203787 301 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm43930-201ENSMUST00000203868 845 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm45031-201ENSMUST00000206800 288 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.3□□□□□ -1.88
Usf1Q61069 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Usf1Q61069 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usf1Q61069 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.3□□□□□ -1.88
Usf1Q61069 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usf1Q61069 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usf1Q61069 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.3□□□□□ -1.88
Usf1Q61069 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usf1Q61069 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.3□□□□□ -1.88
Usf1Q61069 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Usf1Q61069 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usf1Q61069 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usf1Q61069 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Usf1Q61069 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usf1Q61069 Gm11913-201ENSMUST00000119094 336 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm13064-201ENSMUST00000119125 557 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm14240-201ENSMUST00000120353 546 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm22956-201ENSMUST00000122520 80 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.29□□□□□ -1.88
Usf1Q61069 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.29□□□□□ -1.88
Usf1Q61069 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Usf1Q61069 Gm27733-201ENSMUST00000184803 68 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Usf1Q61069 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm42621-201ENSMUST00000198114 275 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm7948-201ENSMUST00000212607 844 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Gm46234-201ENSMUST00000218702 259 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.29□□□□□ -1.88
Usf1Q61069 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Gm23447-201ENSMUST00000082798 163 ntBASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usf1Q61069 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usf1Q61069 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Usf1Q61069 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Usf1Q61069 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usf1Q61069 Gm24118-201ENSMUST00000103972 126 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms