Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm15988-201ENSMUST00000118677 367 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm6762-201ENSMUST00000121769 289 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm14253-201ENSMUST00000122112 639 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm25977-201ENSMUST00000158697 85 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm23773-201ENSMUST00000158985 296 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm23505-201ENSMUST00000158989 130 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm27163-201ENSMUST00000184767 409 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm9775-201ENSMUST00000189402 331 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm19080-201ENSMUST00000196082 550 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 AC131068.3-201ENSMUST00000228438 1456 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Snord35b-201ENSMUST00000082833 87 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm24533-201ENSMUST00000083138 196 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav8d-1Q5R1H8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm26423-201ENSMUST00000104277 128 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Mir291a-201ENSMUST00000104815 82 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm14581-201ENSMUST00000121726 198 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm26100-201ENSMUST00000157245 127 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm23667-201ENSMUST00000157466 120 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm23897-201ENSMUST00000158110 158 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm17030-201ENSMUST00000167016 393 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Mir6408-201ENSMUST00000183643 91 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm37934-201ENSMUST00000192902 402 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm38334-201ENSMUST00000195060 313 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm5983-201ENSMUST00000197739 770 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm44084-201ENSMUST00000203947 409 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm5322-201ENSMUST00000206142 699 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Mir101b-201ENSMUST00000083622 97 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 AF357428-201ENSMUST00000083815 69 ntBASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Trav8d-1Q5R1H8 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm7853-201ENSMUST00000100708 478 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm13064-201ENSMUST00000119125 557 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm11483-201ENSMUST00000119839 247 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm15142-201ENSMUST00000121013 856 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm11446-201ENSMUST00000121319 866 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm11385-201ENSMUST00000121513 570 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm24213-201ENSMUST00000158255 258 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm22910-201ENSMUST00000178568 132 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm27538-201ENSMUST00000185065 294 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm28534-201ENSMUST00000187744 676 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm43090-201ENSMUST00000202459 314 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm36247-201ENSMUST00000211834 285 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Gm20946-201ENSMUST00000212367 461 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav8d-1Q5R1H8 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms