Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm19694-201ENSMUST00000192364 505 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm37007-201ENSMUST00000194234 319 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm20997-201ENSMUST00000205148 231 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Snord14e-201ENSMUST00000082857 90 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm24446-201ENSMUST00000083982 156 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm23060-201ENSMUST00000102345 109 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm16471-201ENSMUST00000121940 618 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm23230-201ENSMUST00000157298 133 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm23325-201ENSMUST00000157422 129 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm20450-201ENSMUST00000173652 147 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm25528-201ENSMUST00000180264 132 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm19498-201ENSMUST00000191128 331 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm2676-201ENSMUST00000207279 606 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Mir21a-201ENSMUST00000083521 92 ntBASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ccdc88bQ4QRL3 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Gm3370-201ENSMUST00000171785 500 ntBASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Gm28534-201ENSMUST00000187744 676 ntBASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Gm44376-201ENSMUST00000197570 128 ntBASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Gm10025-201ENSMUST00000079568 372 ntBASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Gm14627-201ENSMUST00000118931 567 ntBASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Gm24240-201ENSMUST00000157785 135 ntBASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Gm43992-201ENSMUST00000204358 197 ntBASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Gm45778-201ENSMUST00000211959 153 ntBASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Gm13717-201ENSMUST00000119868 365 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Gm6245-201ENSMUST00000164699 768 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Gm26933-201ENSMUST00000182320 827 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Gm37946-201ENSMUST00000192064 347 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Gm24922-201ENSMUST00000158511 102 ntBASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Gm18921-201ENSMUST00000221798 366 ntBASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Gm45461-201ENSMUST00000211726 4535 ntBASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Ccdc88bQ4QRL3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Gm2719-201ENSMUST00000191929 444 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Gm42990-201ENSMUST00000199231 312 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Gm45312-201ENSMUST00000210566 311 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Gm45710-201ENSMUST00000212847 215 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Ccdc88bQ4QRL3 Gm13615-201ENSMUST00000120242 1612 ntBASIC4.75□□□□□ -1.65
Ccdc88bQ4QRL3 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc88bQ4QRL3 Gm9427-201ENSMUST00000116187 651 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms