Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm20773-201ENSMUST00000178940 681 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm27538-201ENSMUST00000185065 294 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm37603-201ENSMUST00000192368 219 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm37670-201ENSMUST00000193622 229 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm37575-201ENSMUST00000195467 309 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm42758-201ENSMUST00000202146 283 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm44634-201ENSMUST00000206119 152 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm32300-201ENSMUST00000221735 515 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm18921-201ENSMUST00000221798 366 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm23443-201ENSMUST00000082916 128 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Mir370-201ENSMUST00000083499 79 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm12636-201ENSMUST00000117395 624 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm14795-201ENSMUST00000118461 471 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm13341-201ENSMUST00000120780 672 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm11896-201ENSMUST00000121105 820 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm25102-201ENSMUST00000122479 112 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm23234-201ENSMUST00000157304 134 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm24768-201ENSMUST00000158512 94 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm17655-201ENSMUST00000167969 255 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm6625-201ENSMUST00000177870 272 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Zfp950-206ENSMUST00000178819 171 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm26933-201ENSMUST00000182320 827 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm2950-201ENSMUST00000185530 520 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm6947-201ENSMUST00000186254 78 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm6501-201ENSMUST00000187178 916 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm29479-201ENSMUST00000190352 455 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm19620-201ENSMUST00000195972 434 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm18410-201ENSMUST00000207199 577 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm16419-201ENSMUST00000221057 625 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm22245-201ENSMUST00000082479 103 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim40Q3UWA4 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm25414-201ENSMUST00000101814 107 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm25726-201ENSMUST00000104529 129 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Mir208b-201ENSMUST00000104735 77 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm15560-201ENSMUST00000117107 643 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm11488-201ENSMUST00000117277 863 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm14607-201ENSMUST00000119119 491 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm11718-201ENSMUST00000119942 537 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm12190-201ENSMUST00000120001 187 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm12383-201ENSMUST00000120628 760 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm13555-201ENSMUST00000121668 319 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms