Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm7438-201ENSMUST00000177664 639 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm7408-201ENSMUST00000178014 639 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm7386-201ENSMUST00000178020 639 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm3657-201ENSMUST00000178170 639 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm7415-201ENSMUST00000178205 639 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm7391-201ENSMUST00000178680 639 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm19637-201ENSMUST00000185933 579 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm28655-201ENSMUST00000191538 692 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm38234-201ENSMUST00000195204 421 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm42805-201ENSMUST00000196158 276 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm43856-201ENSMUST00000197004 369 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm4644-201ENSMUST00000197587 400 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm45063-201ENSMUST00000203726 472 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 AC156560.1-201ENSMUST00000221425 256 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm22829-201ENSMUST00000083771 106 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.27□□□□□ -1.57
Ddb1Q3U1J4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm26019-201ENSMUST00000104407 119 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm11843-201ENSMUST00000118984 425 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm12006-201ENSMUST00000120786 403 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm23352-201ENSMUST00000158428 64 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm18185-201ENSMUST00000186725 667 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm20162-201ENSMUST00000193629 871 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm9722-201ENSMUST00000194568 802 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm44261-201ENSMUST00000203337 209 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Gm25134-201ENSMUST00000082646 160 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Mir370-201ENSMUST00000083499 79 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ddb1Q3U1J4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm42768-201ENSMUST00000197734 2897 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm7618-201ENSMUST00000121643 171 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm23540-201ENSMUST00000157543 164 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm17177-201ENSMUST00000169144 483 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm18396-201ENSMUST00000177095 361 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm25874-201ENSMUST00000178030 79 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Mir7578-201ENSMUST00000183455 82 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm27392-201ENSMUST00000185041 101 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm28872-201ENSMUST00000191518 158 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm42465-201ENSMUST00000197036 492 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 AC161426.1-201ENSMUST00000214137 286 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm35262-201ENSMUST00000215133 267 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Mir99a-201ENSMUST00000083596 65 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm23516-201ENSMUST00000093728 107 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms