Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Neat1-201ENSMUST00000173672 20771 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
Hspg2Q05793 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hspg2Q05793 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm43804-201ENSMUST00000198280 456 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm44161-201ENSMUST00000203532 253 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Mir504-201ENSMUST00000093602 79 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Hspg2Q05793 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Hspg2Q05793 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Hspg2Q05793 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hspg2Q05793 Mir669d-201ENSMUST00000104644 121 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm24907-201ENSMUST00000116932 128 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm14607-201ENSMUST00000119119 491 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm14570-201ENSMUST00000119444 391 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm15536-201ENSMUST00000121411 114 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm22961-201ENSMUST00000157964 106 ntBASIC2.11□□□□□ -2.07
Hspg2Q05793 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.11□□□□□ -2.07
Hspg2Q05793 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Hspg2Q05793 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Hspg2Q05793 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hspg2Q05793 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Trbv10-201ENSMUST00000168322 289 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm38283-201ENSMUST00000193041 695 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm38008-201ENSMUST00000195333 518 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm43276-201ENSMUST00000199712 364 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm25130-201ENSMUST00000082650 156 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm12954-201ENSMUST00000118610 611 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm16327-201ENSMUST00000137146 228 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Mir8096-201ENSMUST00000184526 127 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm27369-201ENSMUST00000185182 71 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm43427-201ENSMUST00000198188 331 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hspg2Q05793 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.1□□□□□ -2.07
Hspg2Q05793 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hspg2Q05793 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hspg2Q05793 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Hspg2Q05793 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hspg2Q05793 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.09□□□□□ -2.07
Hspg2Q05793 Mir3087-201ENSMUST00000199405 56 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm44477-201ENSMUST00000199661 110 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm45474-201ENSMUST00000209471 408 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm45382-201ENSMUST00000210607 151 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Hspg2Q05793 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm22947-201ENSMUST00000158559 91 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm7592-201ENSMUST00000160674 627 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm27399-201ENSMUST00000184250 78 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.09□□□□□ -2.07
Hspg2Q05793 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Hspg2Q05793 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Hspg2Q05793 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 AC153522.2-201ENSMUST00000218389 3853 ntBASIC2.09□□□□□ -2.07
Hspg2Q05793 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Hspg2Q05793 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Hspg2Q05793 Gm4596-201ENSMUST00000117197 442 ntBASIC2.09□□□□□ -2.08
Hspg2Q05793 Gm13555-201ENSMUST00000121668 319 ntBASIC2.09□□□□□ -2.08
Hspg2Q05793 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.09□□□□□ -2.08
Hspg2Q05793 Gm5175-202ENSMUST00000219699 529 ntBASIC2.09□□□□□ -2.08
Hspg2Q05793 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Hspg2Q05793 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC2.09□□□□□ -2.08
Hspg2Q05793 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
Hspg2Q05793 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC2.09□□□□□ -2.08
Hspg2Q05793 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
Hspg2Q05793 Gm26015-201ENSMUST00000104402 125 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm43975-201ENSMUST00000203023 481 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm18644-201ENSMUST00000211458 815 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Hspg2Q05793 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Hspg2Q05793 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
Hspg2Q05793 Cmah-208ENSMUST00000224819 9482 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.08□□□□□ -2.08
Hspg2Q05793 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.08□□□□□ -2.08
Hspg2Q05793 AC155921.1-201ENSMUST00000216568 3841 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Hspg2Q05793 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.08□□□□□ -2.08
Hspg2Q05793 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms