Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm23014-201ENSMUST00000104144 130 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm11971-201ENSMUST00000117715 288 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm11409-201ENSMUST00000118621 403 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm12850-201ENSMUST00000119210 436 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm14647-201ENSMUST00000119392 680 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm11369-201ENSMUST00000120812 318 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm22204-201ENSMUST00000122654 327 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm24113-201ENSMUST00000157477 276 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm25412-201ENSMUST00000180258 107 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Mir6414-201ENSMUST00000183685 82 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Mir3620-201ENSMUST00000184710 61 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm37167-201ENSMUST00000194946 396 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm37836-201ENSMUST00000195875 175 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.35□□□□□ -1.71
Col8a1Q00780 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm44063-201ENSMUST00000203307 376 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm3816-201ENSMUST00000209803 433 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 AC165092.3-201ENSMUST00000223602 282 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm22508-201ENSMUST00000082772 110 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Snord22-201ENSMUST00000083153 126 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm14878-201ENSMUST00000118167 293 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm2005-201ENSMUST00000120759 542 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.34□□□□□ -1.71
Col8a1Q00780 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm20415-201ENSMUST00000172877 423 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm24818-201ENSMUST00000175093 161 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm14527-201ENSMUST00000179300 639 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm25939-201ENSMUST00000179876 191 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Mir7222-201ENSMUST00000183740 75 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm3145-201ENSMUST00000188584 220 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm42672-201ENSMUST00000197821 352 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm44650-201ENSMUST00000206929 194 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.34□□□□□ -1.71
Col8a1Q00780 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm42662-201ENSMUST00000202539 1431 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col8a1Q00780 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.34□□□□□ -1.71
Col8a1Q00780 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Col8a1Q00780 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col8a1Q00780 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.72
Col8a1Q00780 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms