Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm11890-201ENSMUST00000119585 417 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm14804-201ENSMUST00000122322 508 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.2□□□□□ -1.9
Shox2P70390 Gm23168-201ENSMUST00000157156 143 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm9613-201ENSMUST00000171662 196 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.2□□□□□ -1.9
Shox2P70390 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Shox2P70390 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm28628-201ENSMUST00000187006 264 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm28629-201ENSMUST00000187309 263 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm7142-201ENSMUST00000194232 586 ntBASIC3.2□□□□□ -1.9
Shox2P70390 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shox2P70390 Gm44425-201ENSMUST00000203739 429 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Gm45701-201ENSMUST00000212049 235 ntBASIC3.2□□□□□ -1.9
Shox2P70390 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.2□□□□□ -1.9
Shox2P70390 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Shox2P70390 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.2□□□□□ -1.9
Shox2P70390 Gm5548-201ENSMUST00000055878 397 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Shox2P70390 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Shox2P70390 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Shox2P70390 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.2□□□□□ -1.9
Shox2P70390 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shox2P70390 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shox2P70390 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shox2P70390 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm11446-201ENSMUST00000121319 866 ntBASIC3.19□□□□□ -1.9
Shox2P70390 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.19□□□□□ -1.9
Shox2P70390 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm22600-201ENSMUST00000157598 269 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Gm24537-201ENSMUST00000157950 102 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm20162-201ENSMUST00000193629 871 ntBASIC3.19□□□□□ -1.9
Shox2P70390 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shox2P70390 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm43899-201ENSMUST00000203675 246 ntBASIC3.19□□□□□ -1.9
Shox2P70390 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shox2P70390 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shox2P70390 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shox2P70390 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shox2P70390 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm23455-201ENSMUST00000083331 100 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.19□□□□□ -1.9
Shox2P70390 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shox2P70390 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shox2P70390 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shox2P70390 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shox2P70390 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shox2P70390 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shox2P70390 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shox2P70390 Gm11704-201ENSMUST00000120031 214 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm14907-201ENSMUST00000121948 854 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm22718-201ENSMUST00000122701 315 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm22036-201ENSMUST00000157279 215 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm7582-201ENSMUST00000160831 603 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shox2P70390 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Shox2P70390 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shox2P70390 Gm21638-201ENSMUST00000179473 836 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Mir7081-201ENSMUST00000184490 75 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shox2P70390 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Shox2P70390 Gm38201-201ENSMUST00000192143 387 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm18540-201ENSMUST00000204025 526 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm7726-201ENSMUST00000206241 231 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm4528-201ENSMUST00000207905 551 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm39147-201ENSMUST00000211376 465 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Gm45379-201ENSMUST00000211772 549 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shox2P70390 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shox2P70390 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shox2P70390 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.18□□□□□ -1.9
Shox2P70390 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shox2P70390 Gm23942-201ENSMUST00000101956 107 ntBASIC3.17□□□□□ -1.9
Shox2P70390 Gm25727-201ENSMUST00000104522 131 ntBASIC3.17□□□□□ -1.9
Shox2P70390 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Shox2P70390 Gm23213-201ENSMUST00000122715 313 ntBASIC3.17□□□□□ -1.9
Shox2P70390 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.17□□□□□ -1.9
Shox2P70390 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.17□□□□□ -1.9
Shox2P70390 Gm25332-201ENSMUST00000158038 105 ntBASIC3.17□□□□□ -1.9
Shox2P70390 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Shox2P70390 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Shox2P70390 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Shox2P70390 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms