Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.42□□□□□ -1.7
Cux1P53564 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cux1P53564 Gm25485-201ENSMUST00000104120 132 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm11905-201ENSMUST00000117653 678 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cux1P53564 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cux1P53564 Mir8090-201ENSMUST00000185078 136 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm43368-201ENSMUST00000200638 409 ntBASIC4.41□□□□□ -1.7
Cux1P53564 AC174457.1-201ENSMUST00000215932 226 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cux1P53564 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cux1P53564 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cux1P53564 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cux1P53564 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cux1P53564 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm22782-201ENSMUST00000104082 132 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm23803-201ENSMUST00000104610 132 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm14578-201ENSMUST00000122166 391 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.41□□□□□ -1.7
Cux1P53564 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.41□□□□□ -1.7
Cux1P53564 Gm8649-201ENSMUST00000181799 233 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm45038-201ENSMUST00000207537 3838 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm2436-201ENSMUST00000219562 774 ntBASIC4.41□□□□□ -1.7
Cux1P53564 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm4945-201ENSMUST00000075152 453 ntBASIC4.41□□□□□ -1.7
Cux1P53564 Gm13136-201ENSMUST00000121031 2950 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm12985-201ENSMUST00000118376 183 ntBASIC4.4□□□□□ -1.71
Cux1P53564 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.4□□□□□ -1.71
Cux1P53564 Gm22600-201ENSMUST00000157598 269 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm22961-201ENSMUST00000157964 106 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm4468-201ENSMUST00000170206 294 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.4□□□□□ -1.71
Cux1P53564 Mir3076-201ENSMUST00000175415 60 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm29320-201ENSMUST00000185235 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.4□□□□□ -1.71
Cux1P53564 Gm29179-202ENSMUST00000186138 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm28598-201ENSMUST00000186490 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm29448-201ENSMUST00000186675 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm29314-201ENSMUST00000186800 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm28253-202ENSMUST00000187971 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm29268-201ENSMUST00000188669 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm29169-201ENSMUST00000189835 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm28978-201ENSMUST00000191120 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm37172-201ENSMUST00000191926 615 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Gm38075-201ENSMUST00000191979 920 ntBASIC4.4□□□□□ -1.71
Cux1P53564 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.4□□□□□ -1.71
Cux1P53564 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.4□□□□□ -1.71
Cux1P53564 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Mir99a-201ENSMUST00000083596 65 ntBASIC4.4□□□□□ -1.71
Cux1P53564 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cux1P53564 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cux1P53564 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Cux1P53564 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cux1P53564 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cux1P53564 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cux1P53564 Gm22664-201ENSMUST00000158719 105 ntBASIC4.39□□□□□ -1.71
Cux1P53564 Gm20718-201ENSMUST00000176058 259 ntBASIC4.39□□□□□ -1.71
Cux1P53564 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cux1P53564 Gm8747-201ENSMUST00000195392 751 ntBASIC4.39□□□□□ -1.71
Cux1P53564 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.39□□□□□ -1.71
Cux1P53564 Gm45814-201ENSMUST00000212646 775 ntBASIC4.39□□□□□ -1.71
Cux1P53564 AC153936.1-201ENSMUST00000219874 395 ntBASIC4.39□□□□□ -1.71
Cux1P53564 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cux1P53564 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Cux1P53564 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cux1P53564 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cux1P53564 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cux1P53564 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.38□□□□□ -1.71
Cux1P53564 Gm27379-201ENSMUST00000183730 123 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm28871-201ENSMUST00000186191 687 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm45452-201ENSMUST00000210905 177 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm26494-201ENSMUST00000083154 143 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm24493-201ENSMUST00000083805 143 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
Cux1P53564 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Cux1P53564 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.38□□□□□ -1.71
Cux1P53564 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cux1P53564 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Cux1P53564 Gm23957-201ENSMUST00000157209 90 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm25392-201ENSMUST00000157335 297 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm24358-201ENSMUST00000158424 288 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm22500-201ENSMUST00000158982 99 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm17063-201ENSMUST00000168135 456 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Mir7013-201ENSMUST00000183540 72 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm28574-201ENSMUST00000185757 699 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm28057-201ENSMUST00000186603 615 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm28397-201ENSMUST00000187970 699 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm28896-201ENSMUST00000188609 696 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Cux1P53564 Gm28159-201ENSMUST00000190296 696 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm29366-201ENSMUST00000190481 699 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm38356-201ENSMUST00000194313 408 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm38107-201ENSMUST00000194873 696 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm43264-201ENSMUST00000202284 325 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Gm15302-201ENSMUST00000117779 2630 ntBASIC4.37□□□□□ -1.71
Cux1P53564 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cux1P53564 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms