Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HttP42859 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HttP42859 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HttP42859 Gm7592-201ENSMUST00000160674 627 ntBASIC2.99□□□□□ -1.93
HttP42859 Gm46138-201ENSMUST00000215294 426 ntBASIC2.99□□□□□ -1.93
HttP42859 Mir322-201ENSMUST00000083484 95 ntBASIC2.99□□□□□ -1.93
HttP42859 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HttP42859 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.99□□□□□ -1.93
HttP42859 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HttP42859 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
HttP42859 Gm28639-201ENSMUST00000191519 481 ntBASIC2.98□□□□□ -1.93
HttP42859 Gm44161-201ENSMUST00000203532 253 ntBASIC2.98□□□□□ -1.93
HttP42859 Gm5347-201ENSMUST00000210542 2327 ntBASIC2.98□□□□□ -1.93
HttP42859 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HttP42859 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
HttP42859 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HttP42859 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.98□□□□□ -1.93
HttP42859 Gm14848-201ENSMUST00000121850 467 ntBASIC2.98□□□□□ -1.93
HttP42859 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC2.98□□□□□ -1.93
HttP42859 Gm17030-201ENSMUST00000167016 393 ntBASIC2.98□□□□□ -1.93
HttP42859 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.98□□□□□ -1.93
HttP42859 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.98□□□□□ -1.93
HttP42859 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.98□□□□□ -1.93
HttP42859 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HttP42859 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HttP42859 Gm23325-201ENSMUST00000157422 129 ntBASIC2.97□□□□□ -1.93
HttP42859 Gm24532-201ENSMUST00000157951 286 ntBASIC2.97□□□□□ -1.93
HttP42859 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC2.97□□□□□ -1.93
HttP42859 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.97□□□□□ -1.93
HttP42859 AC211878.5-201ENSMUST00000221697 409 ntBASIC2.97□□□□□ -1.93
HttP42859 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HttP42859 Gm38032-201ENSMUST00000195052 1589 ntBASIC2.97□□□□□ -1.93
HttP42859 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HttP42859 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HttP42859 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC2.97□□□□□ -1.93
HttP42859 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HttP42859 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HttP42859 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.97□□□□□ -1.93
HttP42859 Gm23289-201ENSMUST00000175615 108 ntBASIC2.97□□□□□ -1.93
HttP42859 Gm8807-201ENSMUST00000179328 492 ntBASIC2.97□□□□□ -1.93
HttP42859 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HttP42859 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.97□□□□□ -1.93
HttP42859 Gm42828-201ENSMUST00000199669 469 ntBASIC2.97□□□□□ -1.93
HttP42859 AC162934.1-201ENSMUST00000222880 309 ntBASIC2.97□□□□□ -1.93
HttP42859 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.97□□□□□ -1.93
HttP42859 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
HttP42859 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HttP42859 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HttP42859 Mir7242-201ENSMUST00000183710 79 ntBASIC2.96□□□□□ -1.94
HttP42859 Gm23460-201ENSMUST00000083258 109 ntBASIC2.96□□□□□ -1.94
HttP42859 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.96□□□□□ -1.94
HttP42859 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
HttP42859 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.96□□□□□ -1.94
HttP42859 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HttP42859 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
HttP42859 Gm11866-201ENSMUST00000120209 335 ntBASIC2.96□□□□□ -1.94
HttP42859 Gm29668-201ENSMUST00000187802 315 ntBASIC2.96□□□□□ -1.94
HttP42859 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HttP42859 Gm10242-201ENSMUST00000090064 330 ntBASIC2.96□□□□□ -1.94
HttP42859 Gm43466-201ENSMUST00000197836 5214 ntBASIC2.96□□□□□ -1.94
HttP42859 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.96□□□□□ -1.94
HttP42859 Gm9836-201ENSMUST00000117132 216 ntBASIC2.95□□□□□ -1.94
HttP42859 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.95□□□□□ -1.94
HttP42859 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HttP42859 Gm22947-201ENSMUST00000158559 91 ntBASIC2.95□□□□□ -1.94
HttP42859 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HttP42859 Gm45312-201ENSMUST00000210566 311 ntBASIC2.95□□□□□ -1.94
HttP42859 CT025680.1-201ENSMUST00000217375 375 ntBASIC2.95□□□□□ -1.94
HttP42859 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HttP42859 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HttP42859 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HttP42859 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HttP42859 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HttP42859 Gm13155-201ENSMUST00000119277 646 ntBASIC2.95□□□□□ -1.94
HttP42859 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Gm8178-201ENSMUST00000121570 646 ntBASIC2.95□□□□□ -1.94
HttP42859 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Gm16236-201ENSMUST00000159588 379 ntBASIC2.95□□□□□ -1.94
HttP42859 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HttP42859 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.95□□□□□ -1.94
HttP42859 Mir7682-201ENSMUST00000198467 58 ntBASIC2.95□□□□□ -1.94
HttP42859 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.95□□□□□ -1.94
HttP42859 Gm45395-201ENSMUST00000209891 559 ntBASIC2.95□□□□□ -1.94
HttP42859 Gm7588-201ENSMUST00000216866 571 ntBASIC2.95□□□□□ -1.94
HttP42859 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.95□□□□□ -1.94
HttP42859 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HttP42859 Gm23302-201ENSMUST00000082710 100 ntBASIC2.95□□□□□ -1.94
HttP42859 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HttP42859 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HttP42859 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HttP42859 Neat1-201ENSMUST00000173672 20771 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms