Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Traf1P39428 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Traf1P39428 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Traf1P39428 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Traf1P39428 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Traf1P39428 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Traf1P39428 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Traf1P39428 Gm12467-201ENSMUST00000117625 745 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm16458-201ENSMUST00000121428 502 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm13471-201ENSMUST00000122057 433 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.36□□□□□ -1.71
Traf1P39428 Gm23084-201ENSMUST00000157850 114 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm23819-201ENSMUST00000158744 109 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm27392-201ENSMUST00000185041 101 ntBASIC4.36□□□□□ -1.71
Traf1P39428 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.36□□□□□ -1.71
Traf1P39428 Gm42926-201ENSMUST00000200496 697 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.36□□□□□ -1.71
Traf1P39428 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.36□□□□□ -1.71
Traf1P39428 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Traf1P39428 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.36□□□□□ -1.71
Traf1P39428 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Traf1P39428 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Traf1P39428 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Traf1P39428 Gm24626-201ENSMUST00000082621 161 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Traf1P39428 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Traf1P39428 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Traf1P39428 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.36□□□□□ -1.71
Traf1P39428 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Traf1P39428 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Traf1P39428 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
Traf1P39428 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Traf1P39428 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Traf1P39428 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Traf1P39428 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Mir592-201ENSMUST00000102113 96 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm15195-201ENSMUST00000118775 263 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm15799-201ENSMUST00000120899 289 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm14600-201ENSMUST00000121032 630 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm24840-201ENSMUST00000122603 147 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm6058-201ENSMUST00000154261 399 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm19203-201ENSMUST00000174049 939 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm20542-201ENSMUST00000174582 372 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm22776-201ENSMUST00000178634 94 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm23767-201ENSMUST00000179278 94 ntBASIC4.35□□□□□ -1.71
Traf1P39428 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.35□□□□□ -1.71
Traf1P39428 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Traf1P39428 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.35□□□□□ -1.71
Traf1P39428 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.35□□□□□ -1.71
Traf1P39428 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.35□□□□□ -1.71
Traf1P39428 Gm9632-201ENSMUST00000195934 643 ntBASIC4.35□□□□□ -1.71
Traf1P39428 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.35□□□□□ -1.71
Traf1P39428 Gm17989-201ENSMUST00000211543 412 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.35□□□□□ -1.71
Traf1P39428 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.35□□□□□ -1.71
Traf1P39428 AC163664.1-201ENSMUST00000226251 1248 ntBASIC4.35□□□□□ -1.71
Traf1P39428 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.35□□□□□ -1.71
Traf1P39428 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Traf1P39428 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Traf1P39428 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.35□□□□□ -1.71
Traf1P39428 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Traf1P39428 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Traf1P39428 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Traf1P39428 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Traf1P39428 Gm24544-201ENSMUST00000103862 110 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm25727-201ENSMUST00000104522 131 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.34□□□□□ -1.71
Traf1P39428 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Traf1P39428 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm12383-201ENSMUST00000120628 760 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm26254-201ENSMUST00000122491 118 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.34□□□□□ -1.71
Traf1P39428 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.34□□□□□ -1.71
Traf1P39428 Gm4725-201ENSMUST00000151048 587 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm26349-201ENSMUST00000157530 130 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm24289-201ENSMUST00000157629 135 ntBASIC4.34□□□□□ -1.71
Traf1P39428 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Traf1P39428 Gm24080-201ENSMUST00000175178 232 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Traf1P39428 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Traf1P39428 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Traf1P39428 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Traf1P39428 Gm38088-201ENSMUST00000195829 241 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm44392-201ENSMUST00000196758 115 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.34□□□□□ -1.71
Traf1P39428 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm43975-201ENSMUST00000203023 481 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm44615-201ENSMUST00000206548 358 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm18225-201ENSMUST00000216708 742 ntBASIC4.34□□□□□ -1.71
Traf1P39428 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 184.8 ms