Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm11429-201ENSMUST00000119089 144 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm14714-201ENSMUST00000119743 439 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm11506-201ENSMUST00000122414 470 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm17030-201ENSMUST00000167016 393 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Mir5134-201ENSMUST00000175529 78 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm5527-201ENSMUST00000179821 642 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm11394-201ENSMUST00000181421 517 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm28304-201ENSMUST00000185977 312 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm18448-201ENSMUST00000186286 599 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm29256-201ENSMUST00000189094 312 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm28484-201ENSMUST00000190606 312 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm43441-201ENSMUST00000201458 205 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxc11P31313 AC154252.1-201ENSMUST00000226041 473 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm24610-201ENSMUST00000083270 109 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm24446-201ENSMUST00000083982 156 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Hoxc11P31313 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.17□□□□□ -1.74
Hoxc11P31313 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Hoxc11P31313 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Snora64-201ENSMUST00000104521 134 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm11943-201ENSMUST00000119473 327 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm12739-201ENSMUST00000119769 382 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm14301-201ENSMUST00000120181 324 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm6062-201ENSMUST00000120462 631 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm26271-201ENSMUST00000158349 104 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Mir6907-201ENSMUST00000183764 71 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm29045-201ENSMUST00000187278 698 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm28924-201ENSMUST00000190012 241 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Trbv11-201ENSMUST00000194354 260 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm43604-201ENSMUST00000199799 705 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm44650-201ENSMUST00000206929 194 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm5338-201ENSMUST00000209530 639 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.16□□□□□ -1.74
Hoxc11P31313 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
Hoxc11P31313 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Hoxc11P31313 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.16□□□□□ -1.74
Hoxc11P31313 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxc11P31313 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Hoxc11P31313 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Hoxc11P31313 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Hoxc11P31313 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Hoxc11P31313 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Hoxc11P31313 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Hoxc11P31313 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Hoxc11P31313 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Hoxc11P31313 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm14008-201ENSMUST00000120483 274 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm26362-201ENSMUST00000158865 315 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm8676-201ENSMUST00000184206 637 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm5368-201ENSMUST00000189012 589 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Npn2-202ENSMUST00000189275 235 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm42509-201ENSMUST00000197390 781 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm31230-201ENSMUST00000199725 785 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm34091-201ENSMUST00000200875 604 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.15□□□□□ -1.75
Hoxc11P31313 Gm17779-201ENSMUST00000213395 394 ntBASIC4.15□□□□□ -1.75
Hoxc11P31313 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms