Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm15263-201ENSMUST00000121556 642 ntBASIC3.17□□□□□ -1.9
P20040 Gm25292-201ENSMUST00000122797 322 ntBASIC3.17□□□□□ -1.9
P20040 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.17□□□□□ -1.9
P20040 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.17□□□□□ -1.9
P20040 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 Gm25120-201ENSMUST00000180148 79 ntBASIC3.17□□□□□ -1.9
P20040 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm28847-201ENSMUST00000186778 700 ntBASIC3.17□□□□□ -1.9
P20040 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm29365-201ENSMUST00000189461 699 ntBASIC3.17□□□□□ -1.9
P20040 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.17□□□□□ -1.9
P20040 Gm29704-201ENSMUST00000196011 253 ntBASIC3.17□□□□□ -1.9
P20040 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.17□□□□□ -1.9
P20040 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.17□□□□□ -1.9
P20040 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.17□□□□□ -1.9
P20040 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.17□□□□□ -1.9
P20040 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
P20040 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.17□□□□□ -1.9
P20040 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.17□□□□□ -1.9
P20040 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.17□□□□□ -1.9
P20040 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.17□□□□□ -1.9
P20040 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.17□□□□□ -1.9
P20040 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.17□□□□□ -1.9
P20040 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.17□□□□□ -1.9
P20040 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.17□□□□□ -1.9
P20040 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.17□□□□□ -1.9
P20040 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P20040 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
P20040 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
P20040 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
P20040 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
P20040 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.16□□□□□ -1.9
P20040 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
P20040 Gm11874-201ENSMUST00000117437 130 ntBASIC3.16□□□□□ -1.9
P20040 Gm15783-201ENSMUST00000117521 633 ntBASIC3.16□□□□□ -1.9
P20040 Gm15193-201ENSMUST00000120224 865 ntBASIC3.16□□□□□ -1.9
P20040 Gm14881-201ENSMUST00000120366 372 ntBASIC3.16□□□□□ -1.9
P20040 Gm12858-201ENSMUST00000121913 208 ntBASIC3.16□□□□□ -1.9
P20040 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.16□□□□□ -1.9
P20040 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
P20040 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
P20040 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.16□□□□□ -1.9
P20040 Gm15279-201ENSMUST00000155593 288 ntBASIC3.16□□□□□ -1.9
P20040 Gm24905-201ENSMUST00000158129 104 ntBASIC3.16□□□□□ -1.9
P20040 Gm22840-201ENSMUST00000158444 136 ntBASIC3.16□□□□□ -1.9
P20040 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
P20040 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
P20040 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.16□□□□□ -1.9
P20040 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.16□□□□□ -1.9
P20040 Gm28594-201ENSMUST00000187022 661 ntBASIC3.16□□□□□ -1.9
P20040 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.16□□□□□ -1.9
P20040 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.16□□□□□ -1.9
P20040 Gm17781-201ENSMUST00000195232 649 ntBASIC3.16□□□□□ -1.9
P20040 Gm7041-201ENSMUST00000201227 524 ntBASIC3.16□□□□□ -1.9
P20040 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.16□□□□□ -1.9
P20040 Gm5175-202ENSMUST00000219699 529 ntBASIC3.16□□□□□ -1.9
P20040 Gm19233-201ENSMUST00000219772 936 ntBASIC3.16□□□□□ -1.9
P20040 Gm8231-201ENSMUST00000221617 783 ntBASIC3.16□□□□□ -1.9
P20040 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.16□□□□□ -1.9
P20040 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.16□□□□□ -1.9
P20040 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.16□□□□□ -1.9
P20040 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
P20040 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
P20040 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
P20040 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
P20040 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
P20040 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
P20040 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
P20040 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
P20040 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.16□□□□□ -1.9
P20040 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
P20040 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.16□□□□□ -1.9
P20040 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
P20040 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
P20040 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
P20040 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
P20040 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.15□□□□□ -1.9
P20040 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.15□□□□□ -1.91
P20040 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.15□□□□□ -1.91
P20040 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.15□□□□□ -1.91
P20040 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
P20040 Gm12383-201ENSMUST00000120628 760 ntBASIC3.15□□□□□ -1.91
P20040 Gm13511-201ENSMUST00000121167 363 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 125.2 ms