Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RaraP11416 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.5□□□□□ -1.53
RaraP11416 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.5□□□□□ -1.53
RaraP11416 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm25818-201ENSMUST00000083282 164 ntBASIC5.5□□□□□ -1.53
RaraP11416 Mir342-201ENSMUST00000083502 99 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm23848-201ENSMUST00000083826 106 ntBASIC5.5□□□□□ -1.53
RaraP11416 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.5□□□□□ -1.53
RaraP11416 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RaraP11416 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RaraP11416 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.5□□□□□ -1.53
RaraP11416 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RaraP11416 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RaraP11416 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RaraP11416 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RaraP11416 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.49□□□□□ -1.53
RaraP11416 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RaraP11416 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RaraP11416 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RaraP11416 Gm24789-201ENSMUST00000104282 131 ntBASIC5.49□□□□□ -1.53
RaraP11416 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Gm14469-201ENSMUST00000118363 202 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm12704-201ENSMUST00000119789 464 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm13518-201ENSMUST00000120018 233 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm15803-201ENSMUST00000120118 394 ntBASIC5.49□□□□□ -1.53
RaraP11416 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm15022-201ENSMUST00000122074 746 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm24371-201ENSMUST00000122662 267 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm22037-201ENSMUST00000157280 296 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm24944-201ENSMUST00000158330 128 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm24860-201ENSMUST00000158457 276 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm16569-201ENSMUST00000160526 314 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm7609-204ENSMUST00000161424 461 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm17086-201ENSMUST00000171346 484 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm22448-201ENSMUST00000179254 107 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm24464-201ENSMUST00000179697 107 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm26731-201ENSMUST00000180683 543 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.49□□□□□ -1.53
RaraP11416 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm28683-201ENSMUST00000187134 615 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm28840-205ENSMUST00000189320 615 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm28835-203ENSMUST00000190062 615 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Gm36939-201ENSMUST00000194889 439 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm5552-201ENSMUST00000197149 515 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm9332-201ENSMUST00000198431 730 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm44475-201ENSMUST00000204041 424 ntBASIC5.49□□□□□ -1.53
RaraP11416 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.49□□□□□ -1.53
RaraP11416 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.49□□□□□ -1.53
RaraP11416 Gm19195-201ENSMUST00000222018 511 ntBASIC5.49□□□□□ -1.53
RaraP11416 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.49□□□□□ -1.53
RaraP11416 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RaraP11416 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.49□□□□□ -1.53
RaraP11416 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RaraP11416 Olfr713-201ENSMUST00000098139 975 ntBASIC5.49□□□□□ -1.53
RaraP11416 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RaraP11416 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RaraP11416 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.49□□□□□ -1.53
RaraP11416 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.49□□□□□ -1.53
RaraP11416 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RaraP11416 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RaraP11416 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RaraP11416 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.48□□□□□ -1.53
RaraP11416 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RaraP11416 Gm24120-201ENSMUST00000103978 129 ntBASIC5.48□□□□□ -1.53
RaraP11416 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RaraP11416 Gm12039-201ENSMUST00000118219 180 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm14566-201ENSMUST00000118915 321 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm12074-201ENSMUST00000120189 219 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm13787-201ENSMUST00000120422 168 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm11677-201ENSMUST00000121349 977 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.48□□□□□ -1.53
RaraP11416 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.48□□□□□ -1.53
RaraP11416 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.48□□□□□ -1.53
RaraP11416 Gm22843-201ENSMUST00000157710 134 ntBASIC5.48□□□□□ -1.53
RaraP11416 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.48□□□□□ -1.53
RaraP11416 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm28967-201ENSMUST00000187351 281 ntBASIC5.48□□□□□ -1.53
RaraP11416 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms