Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm44137-201ENSMUST00000203670 367 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm45146-201ENSMUST00000207108 221 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.88□□□□□ -1.79
Lire1P11260 Gm18921-201ENSMUST00000221798 366 ntBASIC3.88□□□□□ -1.79
Lire1P11260 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lire1P11260 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lire1P11260 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Lire1P11260 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Lire1P11260 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm24120-201ENSMUST00000103978 129 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm12427-201ENSMUST00000117719 302 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm14731-201ENSMUST00000119216 376 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm12486-201ENSMUST00000120887 541 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm12087-201ENSMUST00000121878 258 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm15274-201ENSMUST00000131442 291 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm21979-201ENSMUST00000139887 291 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm15259-201ENSMUST00000151262 291 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm23415-201ENSMUST00000175519 83 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm26365-201ENSMUST00000179177 94 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm29064-201ENSMUST00000187014 813 ntBASIC3.87□□□□□ -1.79
Lire1P11260 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm43142-201ENSMUST00000198670 361 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm18363-201ENSMUST00000221671 730 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.87□□□□□ -1.79
Lire1P11260 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.87□□□□□ -1.79
Lire1P11260 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm4017-201ENSMUST00000084813 338 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lire1P11260 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.87□□□□□ -1.79
Lire1P11260 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Lire1P11260 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lire1P11260 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Mir105-201ENSMUST00000104655 80 ntBASIC3.86□□□□□ -1.79
Lire1P11260 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.86□□□□□ -1.79
Lire1P11260 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.86□□□□□ -1.79
Lire1P11260 Gm16327-201ENSMUST00000137146 228 ntBASIC3.86□□□□□ -1.79
Lire1P11260 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Lire1P11260 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.86□□□□□ -1.79
Lire1P11260 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.86□□□□□ -1.79
Lire1P11260 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.86□□□□□ -1.79
Lire1P11260 Gm37050-201ENSMUST00000193464 466 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Gm43559-201ENSMUST00000198755 466 ntBASIC3.86□□□□□ -1.79
Lire1P11260 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.86□□□□□ -1.79
Lire1P11260 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.86□□□□□ -1.79
Lire1P11260 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.86□□□□□ -1.79
Lire1P11260 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.86□□□□□ -1.79
Lire1P11260 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.86□□□□□ -1.79
Lire1P11260 AC154239.2-201ENSMUST00000227859 233 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lire1P11260 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lire1P11260 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Lire1P11260 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.86□□□□□ -1.79
Lire1P11260 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lire1P11260 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Lire1P11260 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Lire1P11260 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lire1P11260 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Mir551b-201ENSMUST00000102165 98 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm25169-201ENSMUST00000104190 129 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm25728-201ENSMUST00000104525 159 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm11253-201ENSMUST00000118486 201 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm25177-201ENSMUST00000122634 117 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm23228-201ENSMUST00000157296 270 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm37002-201ENSMUST00000194560 373 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm18384-201ENSMUST00000195974 808 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms