Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm10161-201ENSMUST00000091506 204 ntBASIC3.66□□□□□ -1.82
Chmp6P0C0A3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Chmp6P0C0A3 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.65□□□□□ -1.82
Chmp6P0C0A3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
Chmp6P0C0A3 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.65□□□□□ -1.82
Chmp6P0C0A3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm22019-201ENSMUST00000104359 96 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm11488-201ENSMUST00000117277 863 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm25967-201ENSMUST00000157168 147 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm24537-201ENSMUST00000157950 102 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm16147-201ENSMUST00000162143 373 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm37097-201ENSMUST00000193676 336 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm43415-201ENSMUST00000201934 750 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm44016-201ENSMUST00000203463 164 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm9375-201ENSMUST00000208899 903 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Mir101b-201ENSMUST00000083622 97 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm22864-201ENSMUST00000083950 130 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Chmp6P0C0A3 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm15799-201ENSMUST00000120899 289 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm14810-201ENSMUST00000121628 486 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm13131-201ENSMUST00000122228 321 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm24666-201ENSMUST00000158937 167 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm17030-201ENSMUST00000167016 393 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm22910-201ENSMUST00000178568 132 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm28155-201ENSMUST00000191066 151 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm35876-201ENSMUST00000205044 459 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm45420-201ENSMUST00000211243 425 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm9309-201ENSMUST00000223537 546 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.64□□□□□ -1.83
Chmp6P0C0A3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Chmp6P0C0A3 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Mir804-201ENSMUST00000103251 95 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm14622-201ENSMUST00000117117 468 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm22208-201ENSMUST00000122658 110 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm24002-201ENSMUST00000158456 104 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm24734-201ENSMUST00000158860 262 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm43039-201ENSMUST00000202883 963 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm32381-201ENSMUST00000203192 476 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms