Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col3a1P08121 Gm23633-201ENSMUST00000175293 119 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm23287-201ENSMUST00000179427 116 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm23143-201ENSMUST00000180137 116 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col3a1P08121 Gm29600-201ENSMUST00000188687 377 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm28920-201ENSMUST00000189957 699 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Trav15d-3-201ENSMUST00000198604 167 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.22□□□□□ -1.73
Col3a1P08121 CT573422.1-201ENSMUST00000216655 405 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.22□□□□□ -1.73
Col3a1P08121 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col3a1P08121 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col3a1P08121 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col3a1P08121 Gm24871-201ENSMUST00000083099 116 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm23970-201ENSMUST00000083319 107 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Gm25099-201ENSMUST00000093716 116 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Rnu5g-201ENSMUST00000093721 116 ntBASIC4.22□□□□□ -1.73
Col3a1P08121 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col3a1P08121 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.22□□□□□ -1.73
Col3a1P08121 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col3a1P08121 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.21□□□□□ -1.73
Col3a1P08121 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.21□□□□□ -1.74
Col3a1P08121 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col3a1P08121 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm14786-201ENSMUST00000117127 944 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm12677-201ENSMUST00000118668 426 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm23897-201ENSMUST00000158110 158 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.21□□□□□ -1.74
Col3a1P08121 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col3a1P08121 Zfp950-206ENSMUST00000178819 171 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm28637-201ENSMUST00000179424 345 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm23186-201ENSMUST00000180078 107 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm29299-201ENSMUST00000185609 923 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21489-201ENSMUST00000189668 818 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm29573-201ENSMUST00000190291 919 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 AL590614.1-201ENSMUST00000226037 268 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 AC110380.1-201ENSMUST00000226987 389 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col3a1P08121 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col3a1P08121 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.21□□□□□ -1.74
Col3a1P08121 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Col3a1P08121 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Col3a1P08121 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col3a1P08121 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms