| Hoxa3 | P02831 | Gm12739-201 | ENSMUST00000119769 | 382 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm7071-201 | ENSMUST00000120458 | 462 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm15166-201 | ENSMUST00000120790 | 385 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Vmn2r-ps2-201 | ENSMUST00000121053 | 765 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm12819-201 | ENSMUST00000122223 | 629 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm12898-201 | ENSMUST00000144407 | 642 nt | TSL 3 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm25278-201 | ENSMUST00000157267 | 120 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm24113-201 | ENSMUST00000157477 | 276 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm25665-201 | ENSMUST00000157695 | 110 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm24944-201 | ENSMUST00000158330 | 128 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Mir3058-201 | ENSMUST00000175126 | 91 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm11168-202 | ENSMUST00000178077 | 684 nt | APPRIS ALT2 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm21028-201 | ENSMUST00000179470 | 123 nt | APPRIS P1 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Mir6943-201 | ENSMUST00000185186 | 66 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Sumo1-203 | ENSMUST00000185265 | 532 nt | TSL 3 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | 1700022E09Rik-201 | ENSMUST00000185295 | 299 nt | TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | 2310030A07Rik-201 | ENSMUST00000186460 | 610 nt | TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Nabp1-207 | ENSMUST00000188204 | 972 nt | TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm20203-201 | ENSMUST00000192352 | 332 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm9238-201 | ENSMUST00000196181 | 329 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm43344-201 | ENSMUST00000198723 | 1229 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm4714-201 | ENSMUST00000203395 | 279 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm5001-201 | ENSMUST00000204361 | 331 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm45032-201 | ENSMUST00000205375 | 520 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm45171-201 | ENSMUST00000206360 | 736 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm45556-201 | ENSMUST00000210689 | 345 nt | TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm37797-201 | ENSMUST00000212114 | 815 nt | APPRIS P1 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AC133207.3-201 | ENSMUST00000217694 | 464 nt | TSL 3 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | RMST_1.1-206 | ENSMUST00000218255 | 309 nt | TSL 3 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm3086-202 | ENSMUST00000221248 | 310 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm19786-201 | ENSMUST00000222589 | 580 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AC102575.1-201 | ENSMUST00000225348 | 547 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AC158955.1-201 | ENSMUST00000227140 | 385 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr914-201 | ENSMUST00000057755 | 951 nt | APPRIS P1 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr1300-ps1-201 | ENSMUST00000208175 | 2235 nt | APPRIS P1 TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr736-202 | ENSMUST00000213402 | 2402 nt | APPRIS P1 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Zfp967-202 | ENSMUST00000178443 | 1458 nt | APPRIS P1 TSL 2 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Zfp969-203 | ENSMUST00000179061 | 1458 nt | APPRIS P1 TSL 3 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr1298-202 | ENSMUST00000208284 | 1563 nt | APPRIS P1 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Naa16-201 | ENSMUST00000022597 | 13223 nt | APPRIS P1 TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm36931-201 | ENSMUST00000192997 | 4801 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm8104-201 | ENSMUST00000168165 | 1761 nt | APPRIS P1 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Wac-217 | ENSMUST00000172018 | 1965 nt | TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr741-202 | ENSMUST00000205518 | 3406 nt | APPRIS P1 TSL 2 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Macc1-201 | ENSMUST00000048880 | 3818 nt | APPRIS P1 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Nxf2-203 | ENSMUST00000113189 | 2375 nt | APPRIS P3 TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm31747-201 | ENSMUST00000204638 | 3086 nt | TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm45853-201 | ENSMUST00000212310 | 3171 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Slco1a1-201 | ENSMUST00000042119 | 3395 nt | APPRIS P2 TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm38505-201 | ENSMUST00000174005 | 1326 nt | TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Zfp583-206 | ENSMUST00000165705 | 1707 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm26733-201 | ENSMUST00000180846 | 2046 nt | TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Spag17-204 | ENSMUST00000164539 | 7862 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm44789-201 | ENSMUST00000207195 | 3101 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AC133076.2-201 | ENSMUST00000227678 | 3532 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm44250-201 | ENSMUST00000203092 | 4229 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm44439-201 | ENSMUST00000203379 | 3592 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr822-202 | ENSMUST00000216879 | 2663 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm20939-201 | ENSMUST00000108007 | 1572 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr801-204 | ENSMUST00000216067 | 4014 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm24273-201 | ENSMUST00000102332 | 164 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm25537-201 | ENSMUST00000103851 | 109 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | H2al1n-201 | ENSMUST00000105137 | 514 nt | APPRIS P1 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Zfp931-202 | ENSMUST00000108924 | 962 nt | APPRIS P1 TSL 3 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Hnmt-202 | ENSMUST00000114497 | 994 nt | APPRIS P1 TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm13250-201 | ENSMUST00000117209 | 753 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm15206-201 | ENSMUST00000119143 | 454 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Vmn1r-ps116-201 | ENSMUST00000121544 | 292 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm13180-201 | ENSMUST00000141222 | 440 nt | TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm25883-201 | ENSMUST00000157781 | 271 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Mir1947-201 | ENSMUST00000158235 | 85 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm16094-201 | ENSMUST00000162784 | 427 nt | TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm17191-201 | ENSMUST00000165200 | 417 nt | TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | BC028528-205 | ENSMUST00000171519 | 447 nt | APPRIS P3 TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm20526-201 | ENSMUST00000173416 | 158 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr296-ps1-201 | ENSMUST00000173904 | 1102 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm22851-201 | ENSMUST00000178741 | 94 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm25074-201 | ENSMUST00000178782 | 94 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | 1700010L04Rik-202 | ENSMUST00000178848 | 786 nt | TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm23144-201 | ENSMUST00000180226 | 107 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm27226-201 | ENSMUST00000184676 | 511 nt | TSL 2 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm28390-201 | ENSMUST00000185212 | 700 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm4557-201 | ENSMUST00000185826 | 907 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm4526-201 | ENSMUST00000186039 | 920 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm21856-201 | ENSMUST00000187547 | 696 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm8708-201 | ENSMUST00000188500 | 906 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm21735-201 | ENSMUST00000190360 | 696 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm32391-201 | ENSMUST00000191839 | 540 nt | TSL 2 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm42643-201 | ENSMUST00000200504 | 279 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm43954-201 | ENSMUST00000204634 | 544 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Olfr1064-ps1-201 | ENSMUST00000213670 | 600 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AL513022.1-201 | ENSMUST00000220489 | 504 nt | TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm5955-201 | ENSMUST00000222712 | 219 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AC166358.4-201 | ENSMUST00000223030 | 105 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AL589742.1-201 | ENSMUST00000226034 | 349 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | AC163295.1-201 | ENSMUST00000227840 | 314 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm25147-201 | ENSMUST00000083030 | 105 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm24031-201 | ENSMUST00000083930 | 131 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Ankrd28-204 | ENSMUST00000227089 | 3522 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| Hoxa3 | P02831 | Gm21244-202 | ENSMUST00000189201 | 3115 nt | APPRIS P1 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |