Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.02□□□□□ -1.77
Cbx4O55187 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.02□□□□□ -1.77
Cbx4O55187 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.02□□□□□ -1.77
Cbx4O55187 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.02□□□□□ -1.77
Cbx4O55187 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.02□□□□□ -1.77
Cbx4O55187 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.02□□□□□ -1.77
Cbx4O55187 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Cbx4O55187 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Cbx4O55187 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.02□□□□□ -1.77
Cbx4O55187 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Cbx4O55187 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cbx4O55187 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cbx4O55187 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cbx4O55187 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm336-201ENSMUST00000186376 1480 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm24430-201ENSMUST00000104077 104 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm23322-201ENSMUST00000104464 167 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Snora64-201ENSMUST00000104521 134 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm16431-201ENSMUST00000117454 431 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm8666-201ENSMUST00000117517 292 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm14172-201ENSMUST00000118255 644 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm15113-201ENSMUST00000119280 836 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm12935-201ENSMUST00000119352 246 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm12433-201ENSMUST00000119659 255 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm6591-201ENSMUST00000121063 434 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm14649-201ENSMUST00000121814 324 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm24910-201ENSMUST00000157289 272 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm6486-201ENSMUST00000166202 434 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm18522-201ENSMUST00000173947 650 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm37550-201ENSMUST00000193230 463 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm43604-201ENSMUST00000199799 705 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm3189-201ENSMUST00000205595 832 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm7380-201ENSMUST00000211599 466 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cbx4O55187 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cbx4O55187 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cbx4O55187 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cbx4O55187 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Cbx4O55187 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.01□□□□□ -1.77
Cbx4O55187 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Cbx4O55187 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cbx4O55187 Gm36927-201ENSMUST00000192504 1841 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm44527-202ENSMUST00000204519 1314 ntBASIC4□□□□□ -1.77
Cbx4O55187 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Gm22493-201ENSMUST00000104494 132 ntBASIC4□□□□□ -1.77
Cbx4O55187 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm11623-201ENSMUST00000120176 1225 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4□□□□□ -1.77
Cbx4O55187 Gm11281-201ENSMUST00000141391 576 ntBASIC4□□□□□ -1.77
Cbx4O55187 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Gm22378-201ENSMUST00000157481 111 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm23499-201ENSMUST00000157736 268 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm26036-201ENSMUST00000158149 144 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm24498-201ENSMUST00000158445 102 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cbx4O55187 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cbx4O55187 Gm25873-201ENSMUST00000180317 107 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cbx4O55187 Gm27236-201ENSMUST00000184147 442 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm17916-202ENSMUST00000187634 1187 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms