Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm38041-201ENSMUST00000194445 661 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm20056-201ENSMUST00000194813 519 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm37167-201ENSMUST00000194946 396 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC3.62□□□□□ -1.83
Rpl35aO55142 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC3.62□□□□□ -1.83
Rpl35aO55142 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm7040-201ENSMUST00000223271 443 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm9309-201ENSMUST00000223537 546 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 AC165092.2-201ENSMUST00000224681 368 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Rpl35aO55142 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm10933-201ENSMUST00000221891 1861 ntBASIC3.62□□□□□ -1.83
Rpl35aO55142 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Rpl35aO55142 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rpl35aO55142 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Rpl35aO55142 Gm37589-201ENSMUST00000193609 3994 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm45129-201ENSMUST00000208444 2224 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm13172-201ENSMUST00000118685 256 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm13273-201ENSMUST00000119737 159 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm14804-201ENSMUST00000122322 508 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm15899-201ENSMUST00000128586 238 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.61□□□□□ -1.83
Rpl35aO55142 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm23115-201ENSMUST00000158480 108 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm3531-201ENSMUST00000162698 489 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm19932-201ENSMUST00000177033 313 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Mir7093-201ENSMUST00000184195 101 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm43144-201ENSMUST00000198256 485 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm7407-201ENSMUST00000208301 568 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm18016-201ENSMUST00000216119 801 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 AC154627.3-201ENSMUST00000228441 334 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm22287-201ENSMUST00000083197 107 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm42548-201ENSMUST00000202669 3933 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.61□□□□□ -1.83
Rpl35aO55142 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.61□□□□□ -1.83
Rpl35aO55142 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rpl35aO55142 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
Rpl35aO55142 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Rpl35aO55142 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Rpl35aO55142 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Rpl35aO55142 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm42606-201ENSMUST00000114209 239 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm23879-201ENSMUST00000116874 126 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm14558-201ENSMUST00000117458 381 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm14172-201ENSMUST00000118255 644 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm11346-201ENSMUST00000118346 704 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm12053-201ENSMUST00000119022 252 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm11366-201ENSMUST00000119279 429 ntBASIC3.6□□□□□ -1.83
Rpl35aO55142 Gm13132-201ENSMUST00000121194 472 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms