Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.33□□□□□ -1.72
Smarce1O54941 Snord15a-201ENSMUST00000083888 148 ntBASIC4.33□□□□□ -1.72
Smarce1O54941 Gm5518-201ENSMUST00000084171 648 ntBASIC4.33□□□□□ -1.72
Smarce1O54941 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Smarce1O54941 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Smarce1O54941 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.33□□□□□ -1.72
Smarce1O54941 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.33□□□□□ -1.72
Smarce1O54941 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.33□□□□□ -1.72
Smarce1O54941 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm14142-201ENSMUST00000117833 296 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm13379-201ENSMUST00000118053 621 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm15613-201ENSMUST00000118396 326 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm13555-201ENSMUST00000121668 319 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm24289-201ENSMUST00000157629 135 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm24198-201ENSMUST00000157812 108 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm16101-201ENSMUST00000160695 430 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm37164-201ENSMUST00000192809 637 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm37575-201ENSMUST00000195467 309 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm43004-201ENSMUST00000201872 703 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Gm44634-201ENSMUST00000206119 152 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Smarce1O54941 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.32□□□□□ -1.72
Smarce1O54941 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm23448-201ENSMUST00000083151 104 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smarce1O54941 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smarce1O54941 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.32□□□□□ -1.72
Smarce1O54941 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Smarce1O54941 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smarce1O54941 Gm23271-201ENSMUST00000104052 124 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm12118-201ENSMUST00000119766 532 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Smarce1O54941 Gm14577-201ENSMUST00000121134 256 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm11506-201ENSMUST00000122414 470 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Smarce1O54941 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.31□□□□□ -1.72
Smarce1O54941 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Mir5098-201ENSMUST00000175320 82 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm27342-201ENSMUST00000183530 109 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm28267-201ENSMUST00000191093 265 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm18692-201ENSMUST00000193047 511 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm38332-201ENSMUST00000194189 147 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm42958-201ENSMUST00000197595 318 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm43494-201ENSMUST00000197672 388 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.31□□□□□ -1.72
Smarce1O54941 Gm18410-201ENSMUST00000207199 577 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm18644-201ENSMUST00000211458 815 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Smarce1O54941 Gm24928-201ENSMUST00000083399 107 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Gm25897-201ENSMUST00000083709 107 ntBASIC4.31□□□□□ -1.72
Smarce1O54941 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Smarce1O54941 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Smarce1O54941 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Smarce1O54941 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.3□□□□□ -1.72
Smarce1O54941 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Smarce1O54941 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Smarce1O54941 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Smarce1O54941 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Smarce1O54941 Gm22657-201ENSMUST00000104197 132 ntBASIC4.3□□□□□ -1.72
Smarce1O54941 Gm22208-201ENSMUST00000122658 110 ntBASIC4.3□□□□□ -1.72
Smarce1O54941 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms