Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgb3O54879 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hmgb3O54879 Gm16082-201ENSMUST00000115992 377 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm14776-201ENSMUST00000121029 887 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC2.55□□□□□ -2
Hmgb3O54879 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Hmgb3O54879 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hmgb3O54879 Gm24213-201ENSMUST00000158255 258 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm10357-201ENSMUST00000159886 264 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm28615-201ENSMUST00000187527 482 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm18445-201ENSMUST00000195502 774 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgb3O54879 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.55□□□□□ -2
Hmgb3O54879 Gm43124-201ENSMUST00000201878 278 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Hmgb3O54879 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.55□□□□□ -2
Hmgb3O54879 Gm44513-201ENSMUST00000206811 439 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.55□□□□□ -2
Hmgb3O54879 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hmgb3O54879 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hmgb3O54879 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC2.55□□□□□ -2
Hmgb3O54879 AC166574.3-201ENSMUST00000226725 367 ntBASIC2.55□□□□□ -2
Hmgb3O54879 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Gm25202-201ENSMUST00000082838 191 ntBASIC2.55□□□□□ -2
Hmgb3O54879 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hmgb3O54879 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb3O54879 Gm45884-201ENSMUST00000209540 3416 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb3O54879 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hmgb3O54879 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm7853-201ENSMUST00000100708 478 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm22657-201ENSMUST00000104197 132 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm15074-201ENSMUST00000117603 936 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm11843-201ENSMUST00000118984 425 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm12884-201ENSMUST00000120371 325 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm5963-201ENSMUST00000143451 236 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.54□□□□□ -2
Hmgb3O54879 Gm22722-201ENSMUST00000157467 132 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm25860-201ENSMUST00000158252 126 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm22833-201ENSMUST00000158292 132 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm26141-201ENSMUST00000175299 126 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm27527-201ENSMUST00000183903 99 ntBASIC2.54□□□□□ -2
Hmgb3O54879 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.54□□□□□ -2
Hmgb3O54879 Gm17781-201ENSMUST00000195232 649 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm5983-201ENSMUST00000197739 770 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm35931-201ENSMUST00000203931 448 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm44927-201ENSMUST00000207573 716 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.54□□□□□ -2
Hmgb3O54879 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.54□□□□□ -2
Hmgb3O54879 AC139638.1-201ENSMUST00000218027 364 ntBASIC2.54□□□□□ -2
Hmgb3O54879 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.54□□□□□ -2
Hmgb3O54879 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.54□□□□□ -2
Hmgb3O54879 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC2.54□□□□□ -2
Hmgb3O54879 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.54□□□□□ -2
Hmgb3O54879 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb3O54879 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Hmgb3O54879 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb3O54879 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Hmgb3O54879 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb3O54879 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.53□□□□□ -2
Hmgb3O54879 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb3O54879 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb3O54879 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb3O54879 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.53□□□□□ -2
Hmgb3O54879 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Hmgb3O54879 Gm24987-201ENSMUST00000104453 134 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgb3O54879 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Hmgb3O54879 Gm12335-201ENSMUST00000119738 327 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm11446-201ENSMUST00000121319 866 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm13210-201ENSMUST00000121483 273 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm15065-201ENSMUST00000121699 273 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm23755-201ENSMUST00000157578 343 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm17091-201ENSMUST00000163248 357 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm26219-201ENSMUST00000175216 71 ntBASIC2.53□□□□□ -2
Hmgb3O54879 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Hmgb3O54879 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Hmgb3O54879 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hmgb3O54879 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hmgb3O54879 Mir6971-201ENSMUST00000183497 63 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Mir7020-201ENSMUST00000183787 70 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.53□□□□□ -2
Hmgb3O54879 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.53□□□□□ -2
Hmgb3O54879 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC2.53□□□□□ -2
Hmgb3O54879 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC2.53□□□□□ -2
Hmgb3O54879 AC140344.1-201ENSMUST00000223384 387 ntBASIC2.53□□□□□ -2
Hmgb3O54879 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.53□□□□□ -2
Hmgb3O54879 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms