Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm21599-201ENSMUST00000178249 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm21914-201ENSMUST00000178452 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm21723-201ENSMUST00000178692 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21916-201ENSMUST00000178771 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21801-201ENSMUST00000178865 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21633-201ENSMUST00000178941 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm17412-201ENSMUST00000179261 468 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21821-201ENSMUST00000179646 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm21588-201ENSMUST00000180074 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21780-201ENSMUST00000180128 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21572-201ENSMUST00000180134 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm21529-201ENSMUST00000180175 498 ntBASIC3.15□□□□□ -1.91
DffaO54786 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DffaO54786 Gm29259-201ENSMUST00000186396 694 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm29370-202ENSMUST00000187476 499 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.15□□□□□ -1.91
DffaO54786 Gm32340-201ENSMUST00000192883 259 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm37428-201ENSMUST00000193886 137 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm43198-201ENSMUST00000200927 326 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.15□□□□□ -1.91
DffaO54786 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.15□□□□□ -1.91
DffaO54786 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.15□□□□□ -1.91
DffaO54786 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DffaO54786 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DffaO54786 Gm46233-201ENSMUST00000217831 449 ntBASIC3.15□□□□□ -1.91
DffaO54786 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.15□□□□□ -1.91
DffaO54786 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.15□□□□□ -1.91
DffaO54786 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.15□□□□□ -1.91
DffaO54786 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm7204-201ENSMUST00000062591 600 ntBASIC3.15□□□□□ -1.91
DffaO54786 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Gm22739-201ENSMUST00000083437 160 ntBASIC3.15□□□□□ -1.91
DffaO54786 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.15□□□□□ -1.91
DffaO54786 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
DffaO54786 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DffaO54786 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
DffaO54786 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
DffaO54786 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
DffaO54786 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DffaO54786 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
DffaO54786 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
DffaO54786 Gm22488-201ENSMUST00000116811 127 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.14□□□□□ -1.91
DffaO54786 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.14□□□□□ -1.91
DffaO54786 Gm24905-201ENSMUST00000158129 104 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DffaO54786 Gm20651-201ENSMUST00000177219 329 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm26297-201ENSMUST00000179464 132 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.14□□□□□ -1.91
DffaO54786 Gm28534-201ENSMUST00000187744 676 ntBASIC3.14□□□□□ -1.91
DffaO54786 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm43494-201ENSMUST00000197672 388 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm44513-201ENSMUST00000206811 439 ntBASIC3.14□□□□□ -1.91
DffaO54786 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.14□□□□□ -1.91
DffaO54786 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.14□□□□□ -1.91
DffaO54786 Mir184-201ENSMUST00000083662 69 ntBASIC3.14□□□□□ -1.91
DffaO54786 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DffaO54786 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DffaO54786 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.13□□□□□ -1.91
DffaO54786 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
DffaO54786 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
DffaO54786 Mir291a-201ENSMUST00000104815 82 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm9427-201ENSMUST00000116187 651 ntBASIC3.13□□□□□ -1.91
DffaO54786 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.13□□□□□ -1.91
DffaO54786 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm13511-201ENSMUST00000121167 363 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm3757-201ENSMUST00000125878 675 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm17117-201ENSMUST00000163665 299 ntBASIC3.13□□□□□ -1.91
DffaO54786 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.13□□□□□ -1.91
DffaO54786 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DffaO54786 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DffaO54786 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.13□□□□□ -1.91
DffaO54786 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DffaO54786 Gm28872-201ENSMUST00000191518 158 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm44349-201ENSMUST00000197048 123 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.13□□□□□ -1.91
DffaO54786 Gm5322-201ENSMUST00000206142 699 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DffaO54786 Gm44594-201ENSMUST00000208982 407 ntBASIC3.13□□□□□ -1.91
DffaO54786 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.13□□□□□ -1.91
DffaO54786 Gm7948-201ENSMUST00000212607 844 ntBASIC3.13□□□□□ -1.91
DffaO54786 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.13□□□□□ -1.91
DffaO54786 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.13□□□□□ -1.91
DffaO54786 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DffaO54786 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DffaO54786 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.13□□□□□ -1.91
DffaO54786 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.13□□□□□ -1.91
DffaO54786 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DffaO54786 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
DffaO54786 Gm22115-201ENSMUST00000103976 133 ntBASIC3.12□□□□□ -1.91
DffaO54786 Gm23923-201ENSMUST00000104108 133 ntBASIC3.12□□□□□ -1.91
DffaO54786 Gm24671-201ENSMUST00000104159 158 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms