Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm22478-201ENSMUST00000122570 154 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm23755-201ENSMUST00000157578 343 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm23179-201ENSMUST00000158693 304 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm26141-201ENSMUST00000175299 126 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm43550-201ENSMUST00000200597 303 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm43028-201ENSMUST00000202561 481 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm44765-201ENSMUST00000206927 601 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm45162-201ENSMUST00000209013 618 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm45240-201ENSMUST00000211437 674 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm13607-201ENSMUST00000117875 539 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm24441-201ENSMUST00000157235 281 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm26393-201ENSMUST00000157625 129 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm17085-201ENSMUST00000165425 502 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm25412-201ENSMUST00000180258 107 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm6113-201ENSMUST00000180319 639 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm27236-201ENSMUST00000184147 442 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm36776-201ENSMUST00000207006 203 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm45710-201ENSMUST00000212847 215 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm8785-201ENSMUST00000220259 487 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shank1D3YZU1 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.42□□□□□ -1.86
Shank1D3YZU1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm24715-201ENSMUST00000102377 95 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Mir467h-201ENSMUST00000116759 121 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm12393-201ENSMUST00000117084 848 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm6664-201ENSMUST00000119138 468 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm5384-201ENSMUST00000120313 463 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm14907-201ENSMUST00000121948 854 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm6265-201ENSMUST00000149263 231 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm23022-201ENSMUST00000158768 180 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm45860-201ENSMUST00000212700 334 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 Gm35558-202ENSMUST00000221819 499 ntBASIC3.41□□□□□ -1.86
Shank1D3YZU1 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms