Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a4A2AX52 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm24120-201ENSMUST00000103978 129 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm14627-201ENSMUST00000118931 567 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm12788-201ENSMUST00000119090 308 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm13511-201ENSMUST00000121167 363 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm6245-201ENSMUST00000164699 768 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm21999-201ENSMUST00000165985 387 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm45013-201ENSMUST00000206883 178 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Gm4052-201ENSMUST00000220890 451 ntBASIC2.43□□□□□ -2.02
Col6a4A2AX52 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a4A2AX52 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm13155-201ENSMUST00000119277 646 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm8178-201ENSMUST00000121570 646 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm21990-201ENSMUST00000124692 383 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm27379-201ENSMUST00000183730 123 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm38041-201ENSMUST00000194445 661 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm43369-201ENSMUST00000196373 1552 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm42758-201ENSMUST00000202146 283 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm44016-201ENSMUST00000203463 164 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a4A2AX52 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm16584-201ENSMUST00000159267 189 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm28871-201ENSMUST00000186191 687 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Gm45200-201ENSMUST00000207434 919 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 AC117202.1-201ENSMUST00000227007 445 ntBASIC2.42□□□□□ -2.02
Col6a4A2AX52 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col6a4A2AX52 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm15103-201ENSMUST00000119893 871 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm42539-201ENSMUST00000197009 308 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Mir378a-201ENSMUST00000198300 66 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm5917-201ENSMUST00000217638 721 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm23377-201ENSMUST00000082943 126 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a4A2AX52 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm25500-201ENSMUST00000104426 123 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm24274-201ENSMUST00000116787 124 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm23824-201ENSMUST00000158741 276 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm17159-201ENSMUST00000169043 482 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm23268-201ENSMUST00000175494 78 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm29602-201ENSMUST00000186887 442 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.41□□□□□ -2.02
Col6a4A2AX52 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm43704-201ENSMUST00000196164 496 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm44157-201ENSMUST00000204720 410 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm10343-201ENSMUST00000096279 348 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Gm7709-201ENSMUST00000199391 1858 ntBASIC2.41□□□□□ -2.02
Col6a4A2AX52 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
Col6a4A2AX52 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Col6a4A2AX52 Gm23128-201ENSMUST00000104257 132 ntBASIC2.4□□□□□ -2.02
Col6a4A2AX52 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.4□□□□□ -2.02
Col6a4A2AX52 Gm14142-201ENSMUST00000117833 296 ntBASIC2.4□□□□□ -2.02
Col6a4A2AX52 Gm8649-201ENSMUST00000181799 233 ntBASIC2.4□□□□□ -2.02
Col6a4A2AX52 Gm37293-201ENSMUST00000191658 295 ntBASIC2.4□□□□□ -2.02
Col6a4A2AX52 Gm23128-202ENSMUST00000196578 133 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms