Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm43894-201ENSMUST00000203274 688 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm32222-201ENSMUST00000203296 298 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm3690-201ENSMUST00000211341 262 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm7588-201ENSMUST00000216866 571 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.36□□□□□ -1.87
Scn3aA2ASI5 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm12156-201ENSMUST00000119188 554 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm13743-201ENSMUST00000121486 724 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm22849-201ENSMUST00000157713 307 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm24213-201ENSMUST00000158255 258 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Mir6401-201ENSMUST00000184499 109 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm29552-201ENSMUST00000190548 660 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm37433-201ENSMUST00000192695 678 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm37441-201ENSMUST00000194430 678 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Scn3aA2ASI5 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm25106-201ENSMUST00000122672 134 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm17091-201ENSMUST00000163248 357 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm27315-201ENSMUST00000183977 154 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm43521-201ENSMUST00000197838 255 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm43107-201ENSMUST00000198729 255 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm43922-201ENSMUST00000205071 328 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Gm6841-201ENSMUST00000220602 598 ntBASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.34□□□□□ -1.87
Scn3aA2ASI5 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Gm13009-201ENSMUST00000121307 267 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Gm27636-201ENSMUST00000184528 122 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Gm18748-201ENSMUST00000198507 622 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.34□□□□□ -1.88
Scn3aA2ASI5 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Scn3aA2ASI5 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm23424-201ENSMUST00000103889 110 ntBASIC3.33□□□□□ -1.88
Scn3aA2ASI5 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm28060-201ENSMUST00000191554 189 ntBASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm44754-201ENSMUST00000208155 400 ntBASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm44845-201ENSMUST00000208773 335 ntBASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Scn3aA2ASI5 Gm23911-201ENSMUST00000104596 134 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Mir6917-201ENSMUST00000184111 61 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm27505-201ENSMUST00000185071 110 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms