Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm43930-201ENSMUST00000203868 845 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 Gm44526-201ENSMUST00000204664 121 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 Gm45409-201ENSMUST00000211486 252 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 Gm45778-201ENSMUST00000211959 153 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Scn1aA2APX8 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Scn1aA2APX8 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 Gm24446-201ENSMUST00000083982 156 ntBASIC3.14□□□□□ -1.91
Scn1aA2APX8 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm25168-201ENSMUST00000104189 132 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm13009-201ENSMUST00000121307 267 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm42625-201ENSMUST00000198611 922 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm43295-201ENSMUST00000201439 412 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm23407-201ENSMUST00000082538 91 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Scn1aA2APX8 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.13□□□□□ -1.91
Scn1aA2APX8 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm13687-201ENSMUST00000119857 282 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm16021-201ENSMUST00000121176 219 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm14768-201ENSMUST00000122126 678 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm25106-201ENSMUST00000122672 134 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm25332-201ENSMUST00000158038 105 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm42526-201ENSMUST00000198956 393 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm44972-201ENSMUST00000206419 406 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Mir7k-201ENSMUST00000184115 110 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn1aA2APX8 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.12□□□□□ -1.91
Scn1aA2APX8 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm23747-201ENSMUST00000104228 131 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm649-201ENSMUST00000117284 1054 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm11387-201ENSMUST00000120266 772 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm13460-201ENSMUST00000121274 353 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm6265-201ENSMUST00000149263 231 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm17187-201ENSMUST00000164622 410 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm10074-201ENSMUST00000174543 249 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn1aA2APX8 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm30534-201ENSMUST00000217928 207 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.11□□□□□ -1.91
Scn1aA2APX8 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Scn1aA2APX8 Gm25280-201ENSMUST00000157269 101 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm22764-201ENSMUST00000158370 92 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm29576-201ENSMUST00000188020 678 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm28354-201ENSMUST00000190904 678 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm28655-201ENSMUST00000191538 692 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm37433-201ENSMUST00000192695 678 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm37441-201ENSMUST00000194430 678 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm33973-201ENSMUST00000195148 534 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm19620-201ENSMUST00000195972 434 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.1□□□□□ -1.91
Scn1aA2APX8 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn1aA2APX8 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn1aA2APX8 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn1aA2APX8 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn1aA2APX8 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn1aA2APX8 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm14229-201ENSMUST00000121178 850 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Gm24627-201ENSMUST00000122764 138 ntBASIC3.1□□□□□ -1.91
Scn1aA2APX8 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms