Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm24683-201ENSMUST00000104840 88 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm13681-201ENSMUST00000117925 210 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm13880-201ENSMUST00000118421 474 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm23855-201ENSMUST00000158377 135 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm22891-201ENSMUST00000158641 164 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm3851-201ENSMUST00000168653 318 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm20401-201ENSMUST00000173717 212 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm24819-201ENSMUST00000175094 166 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm37732-201ENSMUST00000194377 316 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm43444-201ENSMUST00000198123 291 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm45150-201ENSMUST00000206051 467 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm7726-201ENSMUST00000206241 231 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm45365-201ENSMUST00000209489 256 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm18258-201ENSMUST00000210413 542 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm2710-201ENSMUST00000073196 603 ntBASIC5.9□□□□□ -1.46
Prpf40aQ9R1C7 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Prpf40aQ9R1C7 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm15994-201ENSMUST00000118029 402 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm11490-201ENSMUST00000118128 272 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm4853-201ENSMUST00000119359 394 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm28860-201ENSMUST00000188103 313 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm44214-201ENSMUST00000204153 606 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm44132-201ENSMUST00000205142 151 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm18850-201ENSMUST00000211578 388 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm22456-201ENSMUST00000082578 125 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm24045-201ENSMUST00000083113 98 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm25755-201ENSMUST00000083396 107 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.89□□□□□ -1.47
Prpf40aQ9R1C7 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm25430-201ENSMUST00000157614 289 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Mir1970-201ENSMUST00000157839 104 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm3053-201ENSMUST00000161709 616 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm10087-201ENSMUST00000167650 330 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm4842-201ENSMUST00000183237 835 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm28389-201ENSMUST00000190090 697 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 288.8 ms