Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm24789-201ENSMUST00000104282 131 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Mir466j-201ENSMUST00000116876 122 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm14870-201ENSMUST00000118414 156 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm15621-201ENSMUST00000119162 364 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm12704-201ENSMUST00000119789 464 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm11481-201ENSMUST00000120069 255 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm25783-201ENSMUST00000122525 190 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm26279-201ENSMUST00000157095 102 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm26489-201ENSMUST00000157880 264 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm24005-201ENSMUST00000158459 296 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm25445-201ENSMUST00000158996 299 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Mir6952-201ENSMUST00000185092 61 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm28623-201ENSMUST00000187219 192 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm37713-201ENSMUST00000191746 198 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm8319-201ENSMUST00000205708 641 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm45498-201ENSMUST00000210346 283 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm11360-201ENSMUST00000221898 262 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm7808-201ENSMUST00000082002 387 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm15846-201ENSMUST00000116022 320 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm22103-201ENSMUST00000116733 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm26475-201ENSMUST00000116769 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm23620-201ENSMUST00000116812 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25042-201ENSMUST00000116856 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25540-201ENSMUST00000116880 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm11572-201ENSMUST00000119164 120 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm15760-201ENSMUST00000119553 283 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm23752-201ENSMUST00000157584 115 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25664-201ENSMUST00000157697 107 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25920-201ENSMUST00000158307 99 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25051-201ENSMUST00000158602 249 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm23550-201ENSMUST00000179003 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25123-201ENSMUST00000179154 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25353-201ENSMUST00000179366 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm22992-201ENSMUST00000179496 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm23966-201ENSMUST00000179823 107 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm25892-201ENSMUST00000179867 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm24092-201ENSMUST00000180257 121 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Mir7006-201ENSMUST00000183624 69 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm27465-201ENSMUST00000184290 91 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm28467-201ENSMUST00000190981 318 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm20203-201ENSMUST00000192352 332 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Igkv13-76-201ENSMUST00000197621 347 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm20144-201ENSMUST00000203031 165 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm4045-201ENSMUST00000204076 310 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm18007-201ENSMUST00000205019 844 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm44648-201ENSMUST00000208267 329 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm18592-201ENSMUST00000221529 276 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm26130-201ENSMUST00000083171 138 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Mir181b-2-201ENSMUST00000083644 89 ntBASIC5.52□□□□□ -1.53
Nubp1Q9R060 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nubp1Q9R060 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms