Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Msh5Q9QUM7 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Msh5Q9QUM7 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.38□□□□□ -1.39
Msh5Q9QUM7 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Msh5Q9QUM7 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Msh5Q9QUM7 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm12010-201ENSMUST00000122400 2017 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm7494-201ENSMUST00000121248 441 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm16298-201ENSMUST00000161107 420 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm27601-201ENSMUST00000184794 127 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm4322-201ENSMUST00000191094 336 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm19195-201ENSMUST00000222018 511 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Mir412-201ENSMUST00000083636 80 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh5Q9QUM7 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Mir669b-201ENSMUST00000102172 97 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm13457-201ENSMUST00000117885 267 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm11920-201ENSMUST00000118491 563 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm12101-201ENSMUST00000121590 390 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm8648-201ENSMUST00000122457 221 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm12504-202ENSMUST00000148026 306 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm23674-201ENSMUST00000157473 131 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm37636-201ENSMUST00000193583 359 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm44208-201ENSMUST00000205199 421 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 AC155715.1-201ENSMUST00000213575 463 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm4556-201ENSMUST00000217808 355 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 AC123533.1-201ENSMUST00000227782 446 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm22509-201ENSMUST00000082775 107 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Mir342-201ENSMUST00000083502 99 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm44789-201ENSMUST00000207195 3101 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh5Q9QUM7 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms