Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25902-201ENSMUST00000158493 318 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Mir6996-201ENSMUST00000183922 61 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm29228-201ENSMUST00000185489 418 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm8823-201ENSMUST00000193158 433 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm4644-201ENSMUST00000197587 400 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm43897-201ENSMUST00000204019 309 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm45742-201ENSMUST00000212400 433 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm35262-201ENSMUST00000215133 267 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm18128-201ENSMUST00000172625 511 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm29509-201ENSMUST00000185716 321 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm29011-201ENSMUST00000191059 712 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm44425-201ENSMUST00000203739 429 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm18892-201ENSMUST00000217628 881 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.22□□□□□ -1.89
Trem1Q9JKE2 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
Trem1Q9JKE2 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm15125-201ENSMUST00000116185 800 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm9009-201ENSMUST00000117321 326 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm13873-201ENSMUST00000119208 427 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm13676-201ENSMUST00000122185 591 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm11233-201ENSMUST00000122357 634 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm6058-201ENSMUST00000154261 399 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm23501-201ENSMUST00000157744 256 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Nron-204ENSMUST00000158971 370 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm16571-201ENSMUST00000159112 291 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm23053-201ENSMUST00000175136 96 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm27564-201ENSMUST00000185196 96 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm3454-201ENSMUST00000185571 412 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm28503-201ENSMUST00000185966 147 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms