Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm18225-201ENSMUST00000216708 742 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm7588-201ENSMUST00000216866 571 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm5649-201ENSMUST00000217918 951 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm15854-201ENSMUST00000118879 808 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm11843-201ENSMUST00000118984 425 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm14907-201ENSMUST00000121948 854 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm14253-201ENSMUST00000122112 639 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm22320-201ENSMUST00000157149 312 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm25058-201ENSMUST00000157365 128 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Mir1934-201ENSMUST00000158127 83 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm28785-201ENSMUST00000187478 379 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm44487-201ENSMUST00000205145 325 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm45312-201ENSMUST00000210566 311 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm3565-201ENSMUST00000222670 609 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm23136-201ENSMUST00000083425 99 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Mir27a-201ENSMUST00000083510 87 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Lima1Q9ERG0 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm24715-201ENSMUST00000102377 95 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm26075-201ENSMUST00000104062 121 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm25420-201ENSMUST00000104216 127 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm12782-201ENSMUST00000117519 727 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm15142-201ENSMUST00000121013 856 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm14581-201ENSMUST00000121726 198 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm24537-201ENSMUST00000157950 102 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Spin2g-201ENSMUST00000178425 687 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm18505-201ENSMUST00000187360 790 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm8242-202ENSMUST00000193056 475 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm37418-201ENSMUST00000195031 274 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm2189-201ENSMUST00000201419 429 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm45245-201ENSMUST00000210082 376 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm4987-201ENSMUST00000078326 408 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Mir101b-201ENSMUST00000083622 97 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.18□□□□□ -1.9
Lima1Q9ERG0 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms