Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm18116-201ENSMUST00000220920 537 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm24235-201ENSMUST00000104319 129 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm11854-201ENSMUST00000117839 446 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm14784-201ENSMUST00000121604 663 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm23743-201ENSMUST00000157389 274 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm25438-201ENSMUST00000158281 110 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm25197-201ENSMUST00000175516 126 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm27028-201ENSMUST00000182303 399 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm28389-201ENSMUST00000190090 697 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm37523-201ENSMUST00000194901 412 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm8747-201ENSMUST00000195392 751 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm43804-201ENSMUST00000198280 456 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm18258-201ENSMUST00000210413 542 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm19219-201ENSMUST00000215863 724 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 AC159885.1-201ENSMUST00000222221 199 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 CT030238.4-201ENSMUST00000228579 801 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm23455-201ENSMUST00000083331 100 ntBASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf1Q9EPU0 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm24120-201ENSMUST00000103978 129 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm22498-201ENSMUST00000104497 86 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm25315-201ENSMUST00000116823 121 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm11606-201ENSMUST00000120706 617 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm9003-201ENSMUST00000121810 482 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm24635-201ENSMUST00000122712 128 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm38075-201ENSMUST00000191979 920 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm43710-201ENSMUST00000199583 452 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm42475-201ENSMUST00000201212 295 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm43968-201ENSMUST00000203388 389 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm44295-201ENSMUST00000203805 437 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm6112-201ENSMUST00000208037 629 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm45588-201ENSMUST00000211213 630 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm10038-201ENSMUST00000077233 441 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Upf1Q9EPU0 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms