Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.29□□□□□ -1.88
Cdc40Q9DC48 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cdc40Q9DC48 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm12578-201ENSMUST00000121244 417 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm23755-201ENSMUST00000157578 343 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm24734-201ENSMUST00000158860 262 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm25835-201ENSMUST00000158917 144 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm16026-202ENSMUST00000159695 772 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm21638-201ENSMUST00000179473 836 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm27308-201ENSMUST00000184807 233 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm29452-201ENSMUST00000187996 313 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm28860-201ENSMUST00000188103 313 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm6680-201ENSMUST00000192789 950 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm43704-201ENSMUST00000196164 496 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm5322-201ENSMUST00000206142 699 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm4052-201ENSMUST00000220890 451 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Gm22304-201ENSMUST00000082688 129 ntBASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cdc40Q9DC48 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm24273-201ENSMUST00000102332 164 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm25097-201ENSMUST00000104042 145 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm15108-201ENSMUST00000116160 803 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm12897-201ENSMUST00000120341 250 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm12543-201ENSMUST00000120410 543 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm12276-201ENSMUST00000121709 301 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm11344-201ENSMUST00000122011 335 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm15111-201ENSMUST00000122142 878 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm15116-201ENSMUST00000122248 663 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm24854-201ENSMUST00000158025 98 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm25555-201ENSMUST00000158078 111 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Mir1264-201ENSMUST00000175381 86 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm6947-201ENSMUST00000186254 78 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm38356-201ENSMUST00000194313 408 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm19620-201ENSMUST00000195972 434 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm19232-201ENSMUST00000211621 652 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm22739-201ENSMUST00000083437 160 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Olfr203-201ENSMUST00000089305 924 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm22444-201ENSMUST00000093693 108 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm336-201ENSMUST00000186376 1480 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.27□□□□□ -1.89
Cdc40Q9DC48 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.26□□□□□ -1.89
Cdc40Q9DC48 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Cdc40Q9DC48 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms