Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm22936-201ENSMUST00000103955 126 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm7846-201ENSMUST00000145844 274 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Mir6413-201ENSMUST00000184049 108 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm32340-201ENSMUST00000192883 259 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm42850-201ENSMUST00000202094 201 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm7588-201ENSMUST00000216866 571 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm19599-201ENSMUST00000218898 358 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm25407-201ENSMUST00000104102 134 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm14786-201ENSMUST00000117127 944 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm15231-201ENSMUST00000119174 447 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm25520-201ENSMUST00000158389 118 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm16490-201ENSMUST00000165299 351 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm20574-201ENSMUST00000182867 917 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Mir6238-201ENSMUST00000184140 129 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm18406-201ENSMUST00000185872 669 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm37085-201ENSMUST00000193780 196 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm43601-201ENSMUST00000196294 945 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm5309-201ENSMUST00000197416 677 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm43227-201ENSMUST00000202239 677 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm43930-201ENSMUST00000203868 845 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm44594-201ENSMUST00000208982 407 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc3Q9D6Y1 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm11890-201ENSMUST00000119585 417 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm11876-201ENSMUST00000120002 269 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm14240-201ENSMUST00000120353 546 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm13443-201ENSMUST00000120770 555 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm26088-201ENSMUST00000157896 131 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm26991-201ENSMUST00000180950 620 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm6991-201ENSMUST00000218475 1178 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Diaph3-206ENSMUST00000226745 713 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm25005-201ENSMUST00000083812 156 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc3Q9D6Y1 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 Gm12230-201ENSMUST00000118301 454 ntBASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.22□□□□□ -1.89
Ccdc3Q9D6Y1 Gm11404-201ENSMUST00000120872 494 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms