Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm7204-201ENSMUST00000062591 600 ntBASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Snora70-201ENSMUST00000083047 137 ntBASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm25317-201ENSMUST00000116824 129 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm11433-201ENSMUST00000118318 228 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm14570-201ENSMUST00000119444 391 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm14687-201ENSMUST00000120206 363 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm6079-201ENSMUST00000121356 404 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm6947-201ENSMUST00000186254 78 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm44349-201ENSMUST00000197048 123 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm44824-201ENSMUST00000207021 229 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm39147-201ENSMUST00000211376 465 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm29884-201ENSMUST00000218403 453 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm5655-201ENSMUST00000221078 901 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm24533-201ENSMUST00000083138 196 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc39Q9D5Y1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Mir673-201ENSMUST00000102361 91 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm12788-201ENSMUST00000119090 308 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm12276-201ENSMUST00000121709 301 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm23775-201ENSMUST00000158991 249 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm5277-201ENSMUST00000164923 556 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Mir1264-201ENSMUST00000175381 86 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm17987-201ENSMUST00000206902 603 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 AC174797.4-201ENSMUST00000225510 347 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 AC115357.1-201ENSMUST00000227575 466 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm26176-201ENSMUST00000083795 105 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm10242-201ENSMUST00000090064 330 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm336-201ENSMUST00000186376 1480 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Ccdc39Q9D5Y1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm22590-201ENSMUST00000104247 128 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm12982-201ENSMUST00000117408 190 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm12118-201ENSMUST00000119766 532 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm14768-201ENSMUST00000122126 678 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm24936-201ENSMUST00000122598 247 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm16359-201ENSMUST00000124511 289 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm24002-201ENSMUST00000158456 104 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm3025-201ENSMUST00000163454 489 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm2878-201ENSMUST00000170173 486 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm20542-201ENSMUST00000174582 372 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms