Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Mir6345-201ENSMUST00000184286 128 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm4644-201ENSMUST00000197587 400 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm43559-201ENSMUST00000198755 466 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm8035-201ENSMUST00000204625 687 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm44830-201ENSMUST00000207667 584 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm45317-201ENSMUST00000210385 223 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm7786-201ENSMUST00000210494 436 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm19540-201ENSMUST00000221843 810 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm2544-201ENSMUST00000222702 756 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm22578-201ENSMUST00000083730 107 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm7648-201ENSMUST00000173036 1658 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.12□□□□□ -1.75
Vps28Q9D1C8 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm24544-201ENSMUST00000103862 110 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm14880-201ENSMUST00000117581 292 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm15452-201ENSMUST00000119877 240 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm14506-201ENSMUST00000121165 536 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm13868-201ENSMUST00000122411 294 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm12998-201ENSMUST00000122445 789 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm24850-201ENSMUST00000158029 119 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm17154-201ENSMUST00000165748 431 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm22398-201ENSMUST00000174941 125 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm25731-201ENSMUST00000175167 125 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm27861-201ENSMUST00000183920 214 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm29598-201ENSMUST00000188996 588 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm38061-201ENSMUST00000192490 365 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm19253-201ENSMUST00000204279 307 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm45316-201ENSMUST00000210128 162 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm25126-201ENSMUST00000083343 102 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Vps28Q9D1C8 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.11□□□□□ -1.75
Vps28Q9D1C8 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm24281-201ENSMUST00000104234 136 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm13687-201ENSMUST00000119857 282 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm15157-201ENSMUST00000121852 702 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm24768-201ENSMUST00000158512 94 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm17155-201ENSMUST00000165969 473 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Mir3112-201ENSMUST00000175431 82 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm37431-201ENSMUST00000195102 111 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm34091-201ENSMUST00000200875 604 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms