Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir676-201ENSMUST00000102443 89 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm22498-201ENSMUST00000104497 86 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm14293-201ENSMUST00000118528 577 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm14516-201ENSMUST00000120012 252 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm7308-201ENSMUST00000121087 447 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm14500-201ENSMUST00000121647 113 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm25318-201ENSMUST00000122554 314 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm26034-201ENSMUST00000158154 116 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm22355-201ENSMUST00000175531 96 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm28976-201ENSMUST00000188070 144 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm38150-201ENSMUST00000192996 452 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm19243-201ENSMUST00000198592 269 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm7946-201ENSMUST00000203326 958 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm44054-201ENSMUST00000203814 372 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm45007-201ENSMUST00000206237 366 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm45857-201ENSMUST00000212207 356 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 AL772265.1-201ENSMUST00000214379 305 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm25792-201ENSMUST00000083289 100 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx56Q9D0R4 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm23879-201ENSMUST00000116874 126 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm22036-201ENSMUST00000157279 215 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm26310-201ENSMUST00000157766 117 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm22769-201ENSMUST00000158367 98 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Mir6541-201ENSMUST00000183649 110 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Mir6382-201ENSMUST00000184055 110 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm9687-201ENSMUST00000189312 602 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm9068-201ENSMUST00000217393 455 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm3338-201ENSMUST00000220982 269 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.8□□□□□ -1.64
Ddx56Q9D0R4 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm24117-201ENSMUST00000103973 133 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm22899-201ENSMUST00000104540 131 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm5353-201ENSMUST00000139800 793 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm23585-201ENSMUST00000157656 102 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Scarna6-201ENSMUST00000158656 265 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Mir3066-201ENSMUST00000175296 83 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm27165-201ENSMUST00000183951 232 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm27163-201ENSMUST00000184767 409 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Mir496b-201ENSMUST00000184935 113 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm28623-201ENSMUST00000187219 192 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Trbv22-201ENSMUST00000191697 291 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms