Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm29747-201ENSMUST00000194764 585 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm44300-201ENSMUST00000196792 121 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm42474-201ENSMUST00000201073 505 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm17917-201ENSMUST00000218561 953 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm6841-201ENSMUST00000220602 598 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm12582-201ENSMUST00000030555 697 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm24611-201ENSMUST00000083272 107 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Mir592-201ENSMUST00000102113 96 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm26273-201ENSMUST00000104180 131 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm13122-201ENSMUST00000118380 453 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm15126-201ENSMUST00000118631 833 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm23168-201ENSMUST00000157156 143 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm19637-201ENSMUST00000185933 579 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm37104-201ENSMUST00000193278 196 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm44656-201ENSMUST00000208428 490 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Gm4052-201ENSMUST00000220890 451 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Smc1aQ9CU62 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Smc1aQ9CU62 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Smc1aQ9CU62 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Smc1aQ9CU62 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.09□□□□□ -1.76
Smc1aQ9CU62 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Smc1aQ9CU62 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Smc1aQ9CU62 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm24096-201ENSMUST00000103905 110 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm14607-201ENSMUST00000119119 491 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm11830-201ENSMUST00000120175 561 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm14739-201ENSMUST00000120424 802 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm6625-201ENSMUST00000177870 272 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm27308-201ENSMUST00000184807 233 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm37617-201ENSMUST00000194309 159 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm9818-201ENSMUST00000050900 255 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Snora70-201ENSMUST00000083047 137 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smc1aQ9CU62 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm12691-201ENSMUST00000120186 456 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm15244-201ENSMUST00000121122 130 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm27828-201ENSMUST00000184108 119 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms